Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene families associated with a MapMan term
All gene family content is shown and individual cells refer to the target genes (per species).
MapMan term
Description MapMan term
amino acid metabolism.degradation.branched chain group.shared
#associated genes61
#associated gene families7
Click table-header(s) to enable sorting
| Gene family | #genes (in total) | #associated genes | species | ath | bdi | cpa | cre | hvu | mac | olu | osa | osaindica | ppa | ptr | sbi | sit | sly | vvi | zma |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HOM03M000794 | 88 | 22 | 16 | 5 | 4 | 4 | 2 | 4 | 9 | 1 | 5 | 8 | 5 | 7 | 1 | 5 | 5 | 10 | 13 |
| HOM03M000727 | 96 | 12 | 16 | 5 | 6 | 6 | 5 | 4 | 12 | 2 | 6 | 10 | 6 | 8 | 5 | 5 | 3 | 7 | 6 |
| HOM03M000903 | 79 | 9 | 16 | 5 | 5 | 4 | 3 | 6 | 6 | 2 | 6 | 6 | 5 | 5 | 3 | 5 | 6 | 6 | 6 |
| HOM03M002838 | 31 | 8 | 14 | 3 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 3 | 0 | 1 | 12 | 2 | 1 |
| HOM03M000623 | 110 | 6 | 16 | 6 | 9 | 6 | 5 | 7 | 7 | 4 | 8 | 7 | 9 | 10 | 6 | 6 | 5 | 6 | 9 |
| HOM03M001836 | 43 | 2 | 16 | 2 | 2 | 1 | 2 | 3 | 4 | 1 | 3 | 5 | 3 | 4 | 3 | 3 | 2 | 2 | 3 |
| HOM03M002487 | 34 | 2 | 14 | 3 | 2 | 2 | 0 | 2 | 2 | 0 | 2 | 2 | 2 | 4 | 3 | 3 | 3 | 1 | 3 |
#genes (in total)
This is the number of genes in the entire gene family.
#associated genesThis is the number of genes that are part of the gene family, and also have the specified MapMan term. Naturaly, this number should be a subset of "#genes (in total)".