GO |
description |
genes |
species |
ath |
bdi |
cpa |
cre |
hvu |
mac |
olu |
osa |
osaindica |
ppa |
ptr |
sbi |
sit |
sly |
vvi |
zma |
GO:0006351 |
transcription, DNA-templated |
26109 |
16 |
3020 |
1393 |
1850 |
338 |
1233 |
2244 |
292 |
1685 |
1910 |
1332 |
2353 |
1521 |
1747 |
1805 |
1317 |
2069 |
GO:2001141 |
regulation of RNA biosynthetic process |
23577 |
16 |
2705 |
1252 |
1715 |
274 |
1103 |
2081 |
238 |
1533 |
1762 |
1170 |
2153 |
1364 |
1582 |
1609 |
1166 |
1870 |
GO:0006355 |
regulation of transcription, DNA-dependent |
23551 |
16 |
2701 |
1252 |
1712 |
273 |
1102 |
2078 |
238 |
1533 |
1762 |
1168 |
2150 |
1364 |
1581 |
1603 |
1165 |
1869 |
GO:0045892 |
negative regulation of transcription, DNA-dependent |
1654 |
16 |
409 |
88 |
84 |
35 |
83 |
93 |
28 |
81 |
87 |
85 |
109 |
82 |
82 |
107 |
96 |
105 |
GO:0045893 |
positive regulation of transcription, DNA-dependent |
1394 |
16 |
473 |
63 |
70 |
28 |
52 |
70 |
21 |
64 |
69 |
71 |
86 |
59 |
63 |
74 |
65 |
66 |
GO:0006352 |
DNA-dependent transcription, initiation |
823 |
16 |
55 |
55 |
50 |
18 |
43 |
64 |
23 |
52 |
60 |
44 |
79 |
51 |
53 |
51 |
48 |
77 |
GO:0006366 |
transcription from RNA polymerase II promoter |
796 |
16 |
85 |
35 |
56 |
24 |
42 |
53 |
26 |
49 |
50 |
65 |
61 |
50 |
50 |
54 |
38 |
58 |
GO:0006342 |
chromatin silencing |
536 |
16 |
246 |
19 |
22 |
7 |
19 |
19 |
8 |
18 |
19 |
23 |
25 |
23 |
19 |
21 |
24 |
24 |
GO:0006357 |
regulation of transcription from RNA polymerase II promoter |
439 |
16 |
29 |
20 |
37 |
13 |
27 |
29 |
13 |
26 |
28 |
41 |
33 |
27 |
23 |
38 |
23 |
32 |
GO:0006367 |
transcription initiation from RNA polymerase II promoter |
235 |
16 |
15 |
11 |
14 |
7 |
9 |
19 |
9 |
18 |
17 |
18 |
23 |
17 |
19 |
10 |
11 |
18 |
GO:0006354 |
DNA-dependent transcription, elongation |
231 |
16 |
132 |
6 |
7 |
6 |
5 |
6 |
8 |
5 |
7 |
8 |
8 |
5 |
5 |
7 |
7 |
9 |
GO:0031048 |
chromatin silencing by small RNA |
208 |
16 |
118 |
5 |
7 |
3 |
7 |
5 |
1 |
4 |
8 |
6 |
6 |
10 |
4 |
6 |
9 |
9 |
GO:0006346 |
methylation-dependent chromatin silencing |
183 |
16 |
121 |
4 |
4 |
1 |
4 |
4 |
3 |
4 |
5 |
5 |
5 |
4 |
5 |
5 |
4 |
5 |
GO:0042793 |
transcription from plastid promoter |
121 |
15 |
72 |
4 |
3 |
3 |
4 |
3 |
0 |
4 |
5 |
2 |
3 |
3 |
4 |
4 |
4 |
3 |
GO:0051090 |
regulation of sequence-specific DNA binding transcription factor activity |
119 |
16 |
7 |
6 |
5 |
3 |
5 |
9 |
3 |
8 |
9 |
7 |
12 |
8 |
7 |
11 |
11 |
8 |
GO:0032784 |
regulation of DNA-dependent transcription, elongation |
89 |
16 |
9 |
5 |
6 |
5 |
4 |
5 |
5 |
4 |
6 |
7 |
7 |
4 |
4 |
5 |
6 |
7 |
GO:0006353 |
DNA-dependent transcription, termination |
87 |
16 |
7 |
5 |
6 |
2 |
5 |
5 |
1 |
5 |
6 |
5 |
9 |
4 |
9 |
8 |
6 |
4 |
GO:0043433 |
negative regulation of sequence-specific DNA binding transcription factor activity |
76 |
16 |
4 |
4 |
3 |
2 |
3 |
6 |
2 |
6 |
7 |
3 |
8 |
4 |
5 |
8 |
5 |
6 |
GO:0031935 |
regulation of chromatin silencing |
76 |
16 |
9 |
4 |
5 |
2 |
5 |
3 |
2 |
4 |
5 |
5 |
6 |
6 |
4 |
6 |
6 |
4 |
GO:0006383 |
transcription from RNA polymerase III promoter |
58 |
16 |
3 |
6 |
4 |
2 |
4 |
5 |
2 |
4 |
3 |
3 |
5 |
4 |
4 |
3 |
3 |
3 |
GO:0006269 |
DNA replication, synthesis of RNA primer |
38 |
16 |
3 |
3 |
2 |
2 |
2 |
2 |
3 |
2 |
2 |
3 |
3 |
1 |
3 |
2 |
2 |
3 |
GO:0009303 |
rRNA transcription |
36 |
16 |
3 |
3 |
2 |
3 |
2 |
3 |
1 |
1 |
3 |
2 |
2 |
2 |
2 |
2 |
3 |
2 |
GO:0006344 |
maintenance of chromatin silencing |
29 |
15 |
2 |
2 |
2 |
0 |
2 |
2 |
1 |
2 |
2 |
1 |
2 |
2 |
2 |
3 |
2 |
2 |
GO:0043620 |
regulation of DNA-dependent transcription in response to stress |
27 |
14 |
4 |
1 |
2 |
0 |
1 |
2 |
0 |
2 |
2 |
4 |
2 |
1 |
1 |
2 |
2 |
1 |
GO:0032786 |
positive regulation of DNA-dependent transcription, elongation |
25 |
16 |
2 |
1 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
3 |
1 |
1 |
1 |
1 |
4 |
GO:0006360 |
transcription from RNA polymerase I promoter |
25 |
16 |
3 |
1 |
2 |
1 |
1 |
2 |
1 |
1 |
1 |
2 |
2 |
1 |
1 |
1 |
4 |
1 |
GO:0016480 |
negative regulation of transcription from RNA polymerase III promoter |
21 |
16 |
1 |
2 |
1 |
1 |
1 |
3 |
1 |
1 |
1 |
2 |
1 |
2 |
1 |
1 |
1 |
1 |
GO:0006359 |
regulation of transcription from RNA polymerase III promoter |
21 |
16 |
1 |
2 |
1 |
1 |
1 |
3 |
1 |
1 |
1 |
2 |
1 |
2 |
1 |
1 |
1 |
1 |
GO:0009301 |
snRNA transcription |
20 |
16 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
5 |
1 |
GO:0006368 |
transcription elongation from RNA polymerase II promoter |
20 |
15 |
1 |
1 |
3 |
2 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
2 |
0 |
1 |
GO:0034243 |
regulation of transcription elongation from RNA polymerase II promoter |
20 |
15 |
1 |
1 |
3 |
2 |
1 |
1 |
1 |
1 |
1 |
2 |
1 |
1 |
1 |
2 |
0 |
1 |
GO:0006348 |
chromatin silencing at telomere |
19 |
16 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
2 |
3 |
GO:0090308 |
regulation of methylation-dependent chromatin silencing |
18 |
14 |
4 |
1 |
1 |
0 |
1 |
1 |
0 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0090309 |
positive regulation of methylation-dependent chromatin silencing |
18 |
14 |
4 |
1 |
1 |
0 |
1 |
1 |
0 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0031937 |
positive regulation of chromatin silencing |
18 |
14 |
4 |
1 |
1 |
0 |
1 |
1 |
0 |
1 |
1 |
2 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0043618 |
regulation of transcription from RNA polymerase II promoter in response to stress |
17 |
14 |
2 |
1 |
1 |
0 |
1 |
1 |
0 |
1 |
1 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0043619 |
regulation of transcription from RNA polymerase II promoter in response to oxidative stress |
16 |
14 |
1 |
1 |
1 |
0 |
1 |
1 |
0 |
1 |
1 |
3 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0009299 |
mRNA transcription |
15 |
8 |
4 |
1 |
2 |
0 |
0 |
1 |
0 |
0 |
0 |
2 |
2 |
2 |
0 |
0 |
1 |
0 |
GO:0009304 |
tRNA transcription |
15 |
14 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
2 |
1 |
0 |
1 |
1 |
GO:0000122 |
negative regulation of transcription from RNA polymerase II promoter |
15 |
11 |
0 |
1 |
0 |
0 |
1 |
2 |
0 |
1 |
1 |
0 |
1 |
1 |
1 |
2 |
1 |
3 |
GO:0031564 |
transcription antitermination |
15 |
15 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0031555 |
transcriptional attenuation |
15 |
15 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0031554 |
regulation of DNA-dependent transcription, termination |
15 |
15 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0045014 |
negative regulation of transcription by glucose |
14 |
14 |
1 |
1 |
1 |
0 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0070919 |
production of siRNA involved in chromatin silencing by small RNA |
14 |
10 |
3 |
1 |
1 |
1 |
2 |
0 |
0 |
0 |
1 |
1 |
1 |
1 |
0 |
0 |
2 |
0 |
GO:0046015 |
regulation of transcription by glucose |
14 |
14 |
1 |
1 |
1 |
0 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0045990 |
carbon catabolite regulation of transcription |
14 |
14 |
1 |
1 |
1 |
0 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0045013 |
carbon catabolite repression of transcription |
14 |
14 |
1 |
1 |
1 |
0 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0042794 |
rRNA transcription from plastid promoter |
14 |
14 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
GO:0006990 |
positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response |
11 |
11 |
1 |
0 |
1 |
0 |
0 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
GO:0045944 |
positive regulation of transcription from RNA polymerase II promoter |
11 |
11 |
1 |
0 |
1 |
0 |
0 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
GO:1901522 |
positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus |
11 |
11 |
1 |
0 |
1 |
0 |
0 |
1 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
GO:0070940 |
dephosphorylation of RNA polymerase II C-terminal domain |
11 |
11 |
1 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
0 |
GO:0031936 |
negative regulation of chromatin silencing |
8 |
8 |
1 |
0 |
1 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
1 |
1 |
0 |
1 |
1 |
0 |
GO:0010964 |
regulation of chromatin silencing by small RNA |
8 |
8 |
1 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
1 |
1 |
1 |
1 |
0 |
1 |
1 |
0 |
GO:0032968 |
positive regulation of transcription elongation from RNA polymerase II promoter |
4 |
3 |
0 |
0 |
2 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
GO:0097056 |
selenocysteinyl-tRNA(Sec) biosynthetic process |
3 |
3 |
1 |
0 |
0 |
1 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0000183 |
chromatin silencing at rDNA |
1 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0061416 |
regulation of transcription from RNA polymerase II promoter in response to salt stress |
1 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0061392 |
regulation of transcription from RNA polymerase II promoter in response to osmotic stress |
1 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0019083 |
viral transcription |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
GO:0030466 |
chromatin silencing at silent mating-type cassette |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0034244 |
negative regulation of transcription elongation from RNA polymerase II promoter |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
GO:0032785 |
negative regulation of DNA-dependent transcription, elongation |
1 |
1 |
0 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |