Child GO terms

Original GO term
GO:0019219
Description
regulation of nucleobase-containing compound metabolic process
Type
BP

GO description genes species ath bdi cpa cre hvu mac olu osa osaindica ppa ptr sbi sit sly vvi zma
GO:0051252 regulation of RNA metabolic process 23703 16 2719 1258 1721 278 1113 2089 240 1542 1773 1178 2163 1371 1589 1614 1175 1880
GO:2001141 regulation of RNA biosynthetic process 23577 16 2705 1252 1715 274 1103 2081 238 1533 1762 1170 2153 1364 1582 1609 1166 1870
GO:0006355 regulation of transcription, DNA-dependent 23551 16 2701 1252 1712 273 1102 2078 238 1533 1762 1168 2150 1364 1581 1603 1165 1869
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 1855 16 423 102 97 43 93 108 35 97 101 95 123 95 95 120 106 122
GO:0051253 negative regulation of RNA metabolic process 1655 16 409 88 84 36 83 93 28 81 87 85 109 82 82 107 96 105
GO:0045892 negative regulation of transcription, DNA-dependent 1654 16 409 88 84 35 83 93 28 81 87 85 109 82 82 107 96 105
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 1530 16 485 71 77 34 60 80 25 72 76 78 98 69 70 81 73 81
GO:0051254 positive regulation of RNA metabolic process 1418 16 475 64 72 29 53 71 22 65 70 73 89 60 64 75 66 70
GO:0045893 positive regulation of transcription, DNA-dependent 1394 16 473 63 70 28 52 70 21 64 69 71 86 59 63 74 65 66
GO:0006140 regulation of nucleotide metabolic process 733 16 57 41 47 24 37 81 20 42 41 44 57 40 43 49 41 69
GO:0051052 regulation of DNA metabolic process 707 16 211 33 29 22 30 36 19 35 32 29 40 38 32 41 34 46
GO:0009118 regulation of nucleoside metabolic process 688 16 55 37 44 24 36 76 20 38 37 42 53 37 40 46 39 64
GO:1900542 regulation of purine nucleotide metabolic process 688 16 55 37 44 24 36 76 20 38 37 42 53 37 40 46 39 64
GO:0030811 regulation of nucleotide catabolic process 678 16 54 37 44 23 35 76 19 37 37 40 52 37 39 46 38 64
GO:0033121 regulation of purine nucleotide catabolic process 678 16 54 37 44 23 35 76 19 37 37 40 52 37 39 46 38 64
GO:0033124 regulation of GTP catabolic process 669 16 53 36 43 22 34 76 18 37 37 39 52 36 39 46 38 63
GO:0043087 regulation of GTPase activity 669 16 53 36 43 22 34 76 18 37 37 39 52 36 39 46 38 63
GO:0032318 regulation of Ras GTPase activity 627 16 41 35 39 21 33 72 16 36 35 38 50 35 37 44 36 59
GO:0006342 chromatin silencing 536 16 246 19 22 7 19 19 8 18 19 23 25 23 19 21 24 24
GO:0006357 regulation of transcription from RNA polymerase II promoter 439 16 29 20 37 13 27 29 13 26 28 41 33 27 23 38 23 32
GO:0006275 regulation of DNA replication 433 16 145 21 16 10 18 20 10 20 17 17 23 23 20 23 22 28
GO:0032313 regulation of Rab GTPase activity 337 16 23 21 17 15 19 34 8 20 20 18 28 21 21 24 20 28
GO:0032312 regulation of ARF GTPase activity 281 16 17 14 21 6 13 37 8 16 15 19 21 14 16 19 15 30
GO:0031048 chromatin silencing by small RNA 208 16 118 5 7 3 7 5 1 4 8 6 6 10 4 6 9 9
GO:0090329 regulation of DNA-dependent DNA replication 189 16 30 12 10 7 11 10 6 11 10 10 12 11 12 12 11 14
GO:0006346 methylation-dependent chromatin silencing 183 16 121 4 4 1 4 4 3 4 5 5 5 4 5 5 4 5
GO:0051053 negative regulation of DNA metabolic process 169 16 16 11 11 7 10 11 7 12 10 9 11 11 11 11 9 12
GO:0032875 regulation of DNA endoreduplication 158 16 25 10 8 6 10 9 4 9 8 9 10 9 10 10 10 11
GO:0051090 regulation of sequence-specific DNA binding transcription factor activity 119 16 7 6 5 3 5 9 3 8 9 7 12 8 7 11 11 8
GO:0008156 negative regulation of DNA replication 116 16 9 8 8 4 7 7 4 8 6 7 8 7 9 9 7 8
GO:0051054 positive regulation of DNA metabolic process 112 16 10 7 5 5 7 9 3 7 6 5 9 9 6 6 7 11
GO:2000104 negative regulation of DNA-dependent DNA replication 101 16 8 7 7 3 6 6 3 7 5 7 7 6 8 8 6 7
GO:0006282 regulation of DNA repair 92 16 7 6 5 6 5 8 3 5 6 5 7 7 6 5 4 7
GO:0032784 regulation of DNA-dependent transcription, elongation 89 16 9 5 6 5 4 5 5 4 6 7 7 4 4 5 6 7
GO:0044030 regulation of DNA methylation 84 16 8 3 5 3 4 4 3 5 5 5 7 4 4 11 6 7
GO:0032204 regulation of telomere maintenance 82 16 54 2 1 1 2 2 2 3 2 1 2 2 2 2 2 2
GO:0031935 regulation of chromatin silencing 76 16 9 4 5 2 5 3 2 4 5 5 6 6 4 6 6 4
GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity 76 16 4 4 3 2 3 6 2 6 7 3 8 4 5 8 5 6
GO:0032876 negative regulation of DNA endoreduplication 75 16 6 5 5 2 5 5 1 5 4 6 5 4 6 6 5 5
GO:0050684 regulation of mRNA processing 66 16 7 2 4 3 7 3 1 4 4 4 5 4 4 3 5 6
GO:0045740 positive regulation of DNA replication 62 16 6 4 2 2 4 5 2 4 3 3 5 5 3 3 5 6
GO:0000018 regulation of DNA recombination 54 16 7 3 3 3 3 4 3 4 4 2 3 4 2 2 2 5
GO:0045910 negative regulation of DNA recombination 54 16 7 3 3 3 3 4 3 4 4 2 3 4 2 2 2 5
GO:0043547 positive regulation of GTPase activity 51 16 25 1 2 1 2 1 1 1 1 2 3 1 2 3 3 2
GO:0045739 positive regulation of DNA repair 50 16 4 3 3 3 3 4 1 3 3 2 4 4 3 3 2 5
GO:0043484 regulation of RNA splicing 49 13 6 3 2 0 5 2 0 4 5 3 4 2 4 0 4 5
GO:0045980 negative regulation of nucleotide metabolic process 45 14 2 4 3 0 1 5 0 4 4 2 4 3 3 3 2 5
GO:0032877 positive regulation of DNA endoreduplication 41 16 4 3 2 2 3 3 1 2 2 2 3 3 2 2 3 4
GO:2000105 positive regulation of DNA-dependent DNA replication 41 16 4 3 2 2 3 3 1 2 2 2 3 3 2 2 3 4
GO:0031440 regulation of mRNA 3'-end processing 39 16 4 1 3 3 4 2 1 2 1 3 3 2 1 3 3 3
GO:0006344 maintenance of chromatin silencing 29 15 2 2 2 0 2 2 1 2 2 1 2 2 2 3 2 2
GO:0032069 regulation of nuclease activity 29 16 2 2 1 2 2 2 1 2 2 2 1 2 2 2 2 2
GO:0032210 regulation of telomere maintenance via telomerase 29 16 2 2 1 1 2 2 2 2 2 1 2 2 2 2 2 2
GO:0043620 regulation of DNA-dependent transcription in response to stress 27 14 4 1 2 0 1 2 0 2 2 4 2 1 1 2 2 1
GO:0048024 regulation of mRNA splicing, via spliceosome 27 13 3 1 1 0 3 1 0 2 3 1 2 2 3 0 2 3
GO:0010520 regulation of reciprocal meiotic recombination 26 15 2 2 2 2 1 2 2 2 2 1 2 2 1 0 1 2
GO:0045128 negative regulation of reciprocal meiotic recombination 26 15 2 2 2 2 1 2 2 2 2 1 2 2 1 0 1 2
GO:0032786 positive regulation of DNA-dependent transcription, elongation 25 16 2 1 3 1 1 1 1 1 1 2 3 1 1 1 1 4
GO:0032320 positive regulation of Ras GTPase activity 24 16 2 1 2 1 2 1 1 1 1 2 2 1 1 2 2 2
GO:0032856 activation of Ras GTPase activity 24 16 2 1 2 1 2 1 1 1 1 2 2 1 1 2 2 2
GO:0051972 regulation of telomerase activity 24 13 3 1 2 0 2 1 0 1 0 2 2 2 2 2 2 2
GO:0051973 positive regulation of telomerase activity 24 13 3 1 2 0 2 1 0 1 0 2 2 2 2 2 2 2
GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 24 13 3 0 2 2 3 1 1 1 0 2 3 1 0 2 2 1
GO:0061013 regulation of mRNA catabolic process 24 13 3 0 2 2 3 1 1 1 0 2 3 1 0 2 2 1
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 24 13 3 0 2 2 3 1 1 1 0 2 3 1 0 2 2 1
GO:0006359 regulation of transcription from RNA polymerase III promoter 21 16 1 2 1 1 1 3 1 1 1 2 1 2 1 1 1 1
GO:0016480 negative regulation of transcription from RNA polymerase III promoter 21 16 1 2 1 1 1 3 1 1 1 2 1 2 1 1 1 1
GO:0034243 regulation of transcription elongation from RNA polymerase II promoter 20 15 1 1 3 2 1 1 1 1 1 2 1 1 1 2 0 1
GO:0006348 chromatin silencing at telomere 19 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3
GO:0031937 positive regulation of chromatin silencing 18 14 4 1 1 0 1 1 0 1 1 2 1 1 1 1 1 1
GO:0090308 regulation of methylation-dependent chromatin silencing 18 14 4 1 1 0 1 1 0 1 1 2 1 1 1 1 1 1
GO:0090309 positive regulation of methylation-dependent chromatin silencing 18 14 4 1 1 0 1 1 0 1 1 2 1 1 1 1 1 1
GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress 17 14 2 1 1 0 1 1 0 1 1 3 1 1 1 1 1 1
GO:0032074 negative regulation of nuclease activity 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress 16 14 1 1 1 0 1 1 0 1 1 3 1 1 1 1 1 1
GO:0048478 replication fork protection 16 15 1 2 1 1 1 1 1 1 1 0 1 1 1 1 1 1
GO:0060700 regulation of ribonuclease activity 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0060701 negative regulation of ribonuclease activity 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:1901917 regulation of exoribonuclease activity 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:1901918 negative regulation of exoribonuclease activity 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0000122 negative regulation of transcription from RNA polymerase II promoter 15 11 0 1 0 0 1 2 0 1 1 0 1 1 1 2 1 3
GO:0000381 regulation of alternative mRNA splicing, via spliceosome 15 11 2 1 0 0 2 1 0 1 1 0 1 1 1 0 2 2
GO:0031554 regulation of DNA-dependent transcription, termination 15 15 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1
GO:0031555 transcriptional attenuation 15 15 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1
GO:0031564 transcription antitermination 15 15 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1
GO:0032205 negative regulation of telomere maintenance 15 15 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1
GO:0032211 negative regulation of telomere maintenance via telomerase 15 15 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1
GO:0032850 positive regulation of ARF GTPase activity 15 15 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1
GO:0032857 activation of ARF GTPase activity 15 15 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1
GO:1900363 regulation of mRNA polyadenylation 15 14 1 1 1 1 1 1 0 1 1 1 0 1 1 1 1 2
GO:1901535 regulation of DNA demethylation 15 15 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1
GO:0032206 positive regulation of telomere maintenance 14 14 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1
GO:0032212 positive regulation of telomere maintenance via telomerase 14 14 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1
GO:0045013 carbon catabolite repression of transcription 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0045014 negative regulation of transcription by glucose 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0045990 carbon catabolite regulation of transcription 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0046015 regulation of transcription by glucose 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0070919 production of siRNA involved in chromatin silencing by small RNA 14 10 3 1 1 1 2 0 0 0 1 1 1 1 0 0 2 0
GO:1901968 regulation of polynucleotide 3'-phosphatase activity 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:1901969 positive regulation of polynucleotide 3'-phosphatase activity 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0006987 activation of signaling protein activity involved in unfolded protein response 13 13 1 1 0 1 1 1 0 1 1 1 0 1 1 1 1 1
GO:0032075 positive regulation of nuclease activity 13 13 1 1 0 1 1 1 0 1 1 1 0 1 1 1 1 1
GO:2000232 regulation of rRNA processing 13 13 1 1 0 1 0 1 1 0 1 1 1 1 1 1 1 1
GO:2000234 positive regulation of rRNA processing 13 13 1 1 0 1 0 1 1 0 1 1 1 1 1 1 1 1
GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response 11 11 1 0 1 0 0 1 0 1 1 1 1 1 1 1 1 0
GO:0045944 positive regulation of transcription from RNA polymerase II promoter 11 11 1 0 1 0 0 1 0 1 1 1 1 1 1 1 1 0
GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain 11 11 1 1 1 1 1 1 1 0 0 1 1 0 0 1 1 0
GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus 11 11 1 0 1 0 0 1 0 1 1 1 1 1 1 1 1 0
GO:0030808 regulation of nucleotide biosynthetic process 10 9 1 0 0 1 1 0 1 1 0 2 1 0 1 0 1 0
GO:0080020 regulation of coenzyme A biosynthetic process 10 9 1 0 0 1 1 0 1 1 0 2 1 0 1 0 1 0
GO:1900371 regulation of purine nucleotide biosynthetic process 10 9 1 0 0 1 1 0 1 1 0 2 1 0 1 0 1 0
GO:0032319 regulation of Rho GTPase activity 9 9 1 0 1 0 1 1 0 0 0 1 1 0 0 1 1 1
GO:0032321 positive regulation of Rho GTPase activity 9 9 1 0 1 0 1 1 0 0 0 1 1 0 0 1 1 1
GO:0032862 activation of Rho GTPase activity 9 9 1 0 1 0 1 1 0 0 0 1 1 0 0 1 1 1
GO:0043462 regulation of ATPase activity 9 9 1 1 1 1 1 0 1 0 0 1 0 1 0 0 0 1
GO:0010964 regulation of chromatin silencing by small RNA 8 8 1 0 1 0 0 0 0 0 1 1 1 1 0 1 1 0
GO:0031936 negative regulation of chromatin silencing 8 8 1 0 1 1 1 0 0 0 0 0 1 1 0 1 1 0
GO:0090296 regulation of mitochondrial DNA replication 5 3 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1
GO:1901858 regulation of mitochondrial DNA metabolic process 5 3 3 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter 4 3 0 0 2 0 0 0 0 0 0 1 1 0 0 0 0 0
GO:0000183 chromatin silencing at rDNA 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0030466 chromatin silencing at silent mating-type cassette 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
GO:0032785 negative regulation of DNA-dependent transcription, elongation 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
GO:0034244 negative regulation of transcription elongation from RNA polymerase II promoter 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
GO:0061392 regulation of transcription from RNA polymerase II promoter in response to osmotic stress 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0061416 regulation of transcription from RNA polymerase II promoter in response to salt stress 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0