Child GO terms

Original GO term
GO:0006396
Description
RNA processing
Type
BP

GO description genes species ath bdi cpa cre hvu mac olu osa osaindica ppa ptr sbi sit sly vvi zma
GO:0034470 ncRNA processing 2421 16 426 118 133 113 98 133 128 135 160 126 177 107 114 187 127 139
GO:0006397 mRNA processing 1953 16 268 106 106 72 98 143 70 115 110 131 146 102 108 135 107 136
GO:0008380 RNA splicing 1442 16 342 69 68 42 64 91 29 80 77 68 97 103 68 76 65 103
GO:0008033 tRNA processing 1278 16 79 67 66 62 57 83 83 78 102 75 110 62 63 130 77 84
GO:0006364 rRNA processing 1158 16 349 52 64 50 39 51 46 59 60 55 70 45 49 56 51 62
GO:0000375 RNA splicing, via transesterification reactions 859 16 148 48 43 26 43 65 18 48 51 47 67 52 50 54 43 56
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 859 16 148 48 43 26 43 65 18 48 51 47 67 52 50 54 43 56
GO:0000398 mRNA splicing, via spliceosome 786 16 137 41 40 25 35 60 18 42 50 43 63 48 45 51 38 50
GO:0006400 tRNA modification 466 16 29 25 28 26 24 34 33 30 48 25 39 23 24 25 26 27
GO:0070918 production of small RNA involved in gene silencing by RNA 407 16 145 20 16 12 18 18 8 16 17 15 22 18 21 21 22 18
GO:0031050 dsRNA fragmentation 407 16 145 20 16 12 18 18 8 16 17 15 22 18 21 21 22 18
GO:0031123 RNA 3'-end processing 401 16 32 26 22 21 24 22 15 32 30 20 28 25 26 27 24 27
GO:0030422 production of siRNA involved in RNA interference 343 16 140 16 12 8 12 16 6 14 13 11 17 14 17 16 16 15
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 278 16 143 8 8 10 7 9 6 9 11 8 13 7 7 8 7 17
GO:0035196 production of miRNAs involved in gene silencing by miRNA 251 16 133 10 7 6 8 6 3 8 9 7 10 8 8 10 9 9
GO:0000154 rRNA modification 216 16 77 8 22 6 4 9 6 8 14 7 17 6 8 8 11 5
GO:0010267 production of ta-siRNAs involved in RNA interference 213 16 111 8 6 4 6 7 1 8 7 5 9 7 8 9 8 9
GO:0043631 RNA polyadenylation 210 16 12 15 13 6 13 13 4 21 21 6 13 14 15 14 12 18
GO:0031124 mRNA 3'-end processing 154 16 14 9 11 8 11 10 4 10 10 8 12 9 10 10 9 9
GO:0009452 7-methylguanosine RNA capping 124 16 10 9 4 6 5 8 4 11 9 14 9 6 5 9 7 8
GO:0036260 RNA capping 124 16 10 9 4 6 5 8 4 11 9 14 9 6 5 9 7 8
GO:0006378 mRNA polyadenylation 114 16 8 8 8 5 8 8 2 7 9 4 8 7 9 8 7 8
GO:0043628 ncRNA 3'-end processing 110 16 11 7 5 9 5 5 7 5 5 7 8 6 7 10 7 6
GO:0000387 spliceosomal snRNP assembly 101 16 7 6 7 3 5 6 3 6 7 10 10 7 6 8 4 6
GO:0000245 spliceosomal complex assembly 97 16 8 6 8 2 4 6 3 6 6 6 12 7 10 2 3 8
GO:0006370 7-methylguanosine mRNA capping 86 16 7 5 3 4 4 5 3 8 5 13 5 4 3 7 5 5
GO:0031167 rRNA methylation 86 16 11 3 17 4 2 5 4 4 5 4 7 2 3 5 8 2
GO:0002097 tRNA wobble base modification 82 16 5 5 7 3 5 5 6 5 9 3 7 5 4 4 4 5
GO:0030488 tRNA methylation 79 16 5 4 5 3 3 6 3 7 8 5 9 3 4 5 5 4
GO:0042780 tRNA 3'-end processing 78 16 5 5 4 7 4 4 5 4 4 5 5 4 4 8 5 5
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 77 16 7 4 4 5 3 6 3 5 6 4 7 3 3 4 4 9
GO:0031425 chloroplast RNA processing 73 16 13 5 4 1 4 5 3 5 4 4 6 4 3 4 4 4
GO:0002098 tRNA wobble uridine modification 71 16 4 4 7 3 4 4 6 4 8 3 6 4 3 4 3 4
GO:0000469 cleavage involved in rRNA processing 67 16 18 3 3 3 2 3 2 3 4 4 3 4 3 5 3 4
GO:0050684 regulation of mRNA processing 66 16 7 2 4 3 7 3 1 4 4 4 5 4 4 3 5 6
GO:0045292 mRNA cis splicing, via spliceosome 66 16 12 3 4 3 2 6 4 3 2 3 6 5 3 2 3 5
GO:0000373 Group II intron splicing 65 14 11 6 2 1 7 5 0 6 0 3 4 3 5 3 4 5
GO:0006379 mRNA cleavage 64 16 9 5 3 4 3 3 3 4 5 3 4 3 5 3 3 4
GO:0006376 mRNA splice site selection 63 16 5 4 3 1 3 6 1 4 5 5 5 5 6 2 2 6
GO:0000478 endonucleolytic cleavage involved in rRNA processing 50 16 17 2 2 2 1 2 1 2 3 3 2 3 2 4 2 2
GO:0043484 regulation of RNA splicing 49 13 6 3 2 0 5 2 0 4 5 3 4 2 4 0 4 5
GO:0031053 primary miRNA processing 46 16 5 3 3 3 3 2 2 3 3 3 3 2 3 3 2 3
GO:0001682 tRNA 5'-leader removal 43 16 3 2 3 2 2 5 2 2 3 3 3 2 2 2 5 2
GO:0008616 queuosine biosynthetic process 42 15 0 2 3 2 2 3 3 2 6 4 5 2 2 2 2 2
GO:0010239 chloroplast mRNA processing 41 15 3 3 3 0 3 2 1 3 3 3 4 2 2 3 3 3
GO:0010599 production of lsiRNA involved in RNA interference 40 15 3 3 2 2 3 3 0 3 3 2 3 2 3 3 3 2
GO:0031440 regulation of mRNA 3'-end processing 39 16 4 1 3 3 4 2 1 2 1 3 3 2 1 3 3 3
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 39 16 6 1 3 3 3 2 2 2 1 4 4 2 1 2 2 1
GO:1901259 chloroplast rRNA processing 38 16 3 3 3 1 2 2 2 3 2 2 3 2 2 3 3 2
GO:0034227 tRNA thio-modification 37 16 4 2 1 2 1 4 1 3 3 2 3 2 2 3 2 2
GO:0000380 alternative mRNA splicing, via spliceosome 34 15 4 2 1 1 2 4 0 2 2 1 3 2 3 1 3 3
GO:0016180 snRNA processing 33 16 2 2 3 1 2 2 1 2 2 2 3 2 3 2 2 2
GO:0000244 spliceosomal tri-snRNP complex assembly 30 16 2 1 1 1 1 2 1 2 3 1 4 2 2 4 1 2
GO:0042779 tRNA 3'-trailer cleavage 27 16 2 2 1 4 1 1 3 1 1 3 2 1 1 2 1 1
GO:0048024 regulation of mRNA splicing, via spliceosome 27 13 3 1 1 0 3 1 0 2 3 1 2 2 3 0 2 3
GO:0070526 threonylcarbamoyladenosine biosynthetic process 25 16 1 1 1 3 1 2 2 2 4 1 1 1 1 1 1 2
GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 24 13 3 0 2 2 3 1 1 1 0 2 3 1 0 2 2 1
GO:0030490 maturation of SSU-rRNA 23 14 9 1 1 2 1 1 0 1 0 1 1 1 1 1 1 1
GO:0019988 charged-tRNA amino acid modification 20 16 1 1 1 2 1 2 1 1 3 1 1 1 1 1 1 1
GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA 20 16 1 1 1 2 1 2 1 1 3 1 1 1 1 1 1 1
GO:0035279 mRNA cleavage involved in gene silencing by miRNA 19 14 6 1 1 1 1 1 0 1 1 1 1 0 1 1 1 1
GO:0070475 rRNA base methylation 18 14 2 1 1 1 0 1 1 2 1 2 1 0 1 1 2 1
GO:0034477 U6 snRNA 3'-end processing 18 16 1 1 1 1 1 1 1 1 1 1 2 1 2 1 1 1
GO:0034472 snRNA 3'-end processing 18 16 1 1 1 1 1 1 1 1 1 1 2 1 2 1 1 1
GO:0043144 snoRNA processing 17 16 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:1900363 regulation of mRNA polyadenylation 15 14 1 1 1 1 1 1 0 1 1 1 0 1 1 1 1 2
GO:0000381 regulation of alternative mRNA splicing, via spliceosome 15 11 2 1 0 0 2 1 0 1 1 0 1 1 1 0 2 2
GO:0071076 RNA 3' uridylation 15 15 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1
GO:0070919 production of siRNA involved in chromatin silencing by small RNA 14 10 3 1 1 1 2 0 0 0 1 1 1 1 0 0 2 0
GO:0000470 maturation of LSU-rRNA 14 14 1 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1
GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 14 14 1 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1
GO:0031125 rRNA 3'-end processing 14 10 5 1 0 1 0 0 1 0 0 1 1 1 1 1 1 0
GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 14 14 1 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1
GO:2000232 regulation of rRNA processing 13 13 1 1 0 1 0 1 1 0 1 1 1 1 1 1 1 1
GO:2000234 positive regulation of rRNA processing 13 13 1 1 0 1 0 1 1 0 1 1 1 1 1 1 1 1
GO:0000354 cis assembly of pre-catalytic spliceosome 12 10 2 1 1 1 0 0 1 1 0 0 2 1 1 0 0 1
GO:0002100 tRNA wobble adenosine to inosine editing 11 11 1 1 0 0 1 1 0 1 1 0 1 1 1 0 1 1
GO:0000374 Group III intron splicing 9 9 1 1 1 0 1 0 0 0 1 1 0 1 0 0 1 1
GO:0000376 RNA splicing, via transesterification reactions with guanosine as nucleophile 9 9 1 1 0 0 1 1 0 1 0 0 1 1 1 0 1 0
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 9 2 8 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000372 Group I intron splicing 9 9 1 1 0 0 1 1 0 1 0 0 1 1 1 0 1 0
GO:0036265 RNA (guanine-N7)-methylation 8 4 3 0 0 0 0 0 0 3 1 0 0 0 0 0 0 1
GO:0000963 mitochondrial RNA processing 7 6 2 1 0 0 0 0 0 0 1 1 0 0 1 0 1 0
GO:0000460 maturation of 5.8S rRNA 5 2 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5 2 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5 2 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5 2 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5 2 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000395 mRNA 5'-splice site recognition 3 2 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0
GO:0000390 spliceosomal complex disassembly 2 2 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0
GO:0070329 tRNA seleno-modification 2 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0
GO:0002943 tRNA dihydrouridine synthesis 2 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
GO:0031591 wybutosine biosynthetic process 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0031426 polycistronic mRNA processing 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0031118 rRNA pseudouridine synthesis 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0031054 pre-miRNA processing 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000966 RNA 5'-end processing 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0002103 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0