Child GO terms
- Original GO term
- GO:0003677
- Description
- DNA binding
- Type
- MF
GO | description | genes | species | ath | bdi | cpa | cre | hvu | mac | olu | osa | osaindica | ppa | ptr | sbi | sit | sly | vvi | zma |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GO:0043565 | sequence-specific DNA binding | 7076 | 16 | 469 | 395 | 661 | 82 | 338 | 708 | 51 | 464 | 545 | 313 | 654 | 443 | 512 | 508 | 332 | 601 |
GO:0043566 | structure-specific DNA binding | 871 | 16 | 78 | 44 | 57 | 30 | 54 | 73 | 28 | 48 | 51 | 57 | 73 | 51 | 47 | 75 | 55 | 50 |
GO:0000975 | regulatory region DNA binding | 718 | 16 | 58 | 39 | 34 | 10 | 33 | 85 | 8 | 48 | 48 | 47 | 58 | 45 | 48 | 56 | 39 | 62 |
GO:0044212 | transcription regulatory region DNA binding | 705 | 16 | 57 | 38 | 34 | 9 | 33 | 84 | 7 | 48 | 47 | 46 | 57 | 44 | 47 | 55 | 38 | 61 |
GO:0003690 | double-stranded DNA binding | 541 | 16 | 45 | 26 | 39 | 20 | 33 | 40 | 20 | 30 | 30 | 39 | 42 | 30 | 25 | 56 | 35 | 31 |
GO:0000976 | transcription regulatory region sequence-specific DNA binding | 495 | 16 | 35 | 26 | 25 | 1 | 21 | 67 | 1 | 35 | 35 | 31 | 45 | 32 | 31 | 40 | 24 | 46 |
GO:0003684 | damaged DNA binding | 486 | 16 | 32 | 27 | 35 | 22 | 25 | 37 | 30 | 30 | 36 | 30 | 35 | 30 | 27 | 28 | 24 | 38 |
GO:0003697 | single-stranded DNA binding | 365 | 16 | 37 | 20 | 21 | 11 | 20 | 37 | 10 | 20 | 22 | 23 | 35 | 23 | 22 | 22 | 22 | 20 |
GO:0030983 | mismatched DNA binding | 274 | 16 | 13 | 11 | 21 | 11 | 17 | 24 | 11 | 12 | 14 | 17 | 22 | 17 | 12 | 38 | 17 | 17 |
GO:0042162 | telomeric DNA binding | 110 | 16 | 12 | 6 | 5 | 4 | 5 | 8 | 5 | 7 | 7 | 6 | 10 | 7 | 7 | 7 | 7 | 7 |
GO:0010385 | double-stranded methylated DNA binding | 64 | 16 | 6 | 4 | 3 | 1 | 4 | 4 | 1 | 5 | 4 | 5 | 4 | 4 | 4 | 5 | 5 | 5 |
GO:0001047 | core promoter binding | 57 | 15 | 5 | 3 | 4 | 0 | 3 | 3 | 1 | 3 | 4 | 3 | 4 | 6 | 4 | 6 | 4 | 4 |
GO:0008327 | methyl-CpG binding | 51 | 15 | 20 | 2 | 1 | 1 | 2 | 3 | 0 | 2 | 2 | 3 | 3 | 2 | 2 | 3 | 3 | 2 |
GO:0031490 | chromatin DNA binding | 47 | 16 | 7 | 2 | 3 | 2 | 4 | 2 | 1 | 3 | 4 | 4 | 4 | 2 | 2 | 2 | 3 | 2 |
GO:0003689 | DNA clamp loader activity | 35 | 16 | 1 | 1 | 4 | 1 | 1 | 1 | 2 | 1 | 1 | 4 | 8 | 3 | 4 | 1 | 1 | 1 |
GO:0001046 | core promoter sequence-specific DNA binding | 30 | 15 | 3 | 1 | 3 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 4 | 2 | 3 | 2 | 2 |
GO:0003691 | double-stranded telomeric DNA binding | 29 | 16 | 5 | 1 | 2 | 1 | 1 | 2 | 1 | 3 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | 2 |
GO:0001159 | core promoter proximal region DNA binding | 27 | 15 | 4 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
GO:0000987 | core promoter proximal region sequence-specific DNA binding | 27 | 15 | 4 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
GO:0000182 | rDNA binding | 23 | 14 | 2 | 1 | 2 | 0 | 1 | 2 | 0 | 2 | 1 | 1 | 2 | 2 | 1 | 2 | 2 | 2 |
GO:0043047 | single-stranded telomeric DNA binding | 22 | 16 | 4 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 |
GO:0001013 | RNA polymerase I regulatory region DNA binding | 21 | 15 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 4 | 2 | 2 | 1 | 1 |
GO:0001163 | RNA polymerase I regulatory region sequence-specific DNA binding | 21 | 15 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 4 | 2 | 2 | 1 | 1 |
GO:0001164 | RNA polymerase I CORE element sequence-specific DNA binding | 21 | 15 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 4 | 2 | 2 | 1 | 1 |
GO:0003680 | AT DNA binding | 18 | 12 | 4 | 2 | 2 | 0 | 1 | 1 | 0 | 0 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0008301 | DNA binding, bending | 14 | 12 | 2 | 1 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 |
GO:0080084 | 5S rDNA binding | 10 | 10 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 |
GO:0097100 | supercoiled DNA binding | 7 | 7 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 0 |
GO:0001012 | RNA polymerase II regulatory region DNA binding | 7 | 7 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 1 |
GO:0000979 | RNA polymerase II core promoter sequence-specific DNA binding | 7 | 7 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 1 |
GO:0000977 | RNA polymerase II regulatory region sequence-specific DNA binding | 7 | 7 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 1 |
GO:0001158 | enhancer sequence-specific DNA binding | 6 | 5 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 1 | 0 |
GO:0035326 | enhancer binding | 6 | 5 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 1 | 0 |
GO:0032135 | DNA insertion or deletion binding | 5 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000217 | DNA secondary structure binding | 5 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0032137 | guanine/thymine mispair binding | 4 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0032138 | single base insertion or deletion binding | 4 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0070361 | mitochondrial light strand promoter anti-sense binding | 4 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000400 | four-way junction DNA binding | 4 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0003688 | DNA replication origin binding | 3 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000404 | loop DNA binding | 2 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0031492 | nucleosomal DNA binding | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000406 | double-strand/single-strand DNA junction binding | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000403 | Y-form DNA binding | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |