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Gene
GO/InterPro/MapMan description
Binding site description/sequence
Gene family
GO ID
MapMan ID
TF family
All species
Arabidopsis thaliana
Brachypodium distachyon
Carica papaya
Chlamydomonas reinhardtii
Hordeum vulgare
Musa acuminata
Oryza sativa ssp. indica
Oryza sativa ssp. japonica
Ostreococcus lucimarinus
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Setaria italica
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Monocots PLAZA 3.0
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pico-PLAZA 2.0
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Parental GO terms
Original GO term
GO:0000154
Description
rRNA modification
Type
BP
GO
description
genes
species
ath
bdi
cpa
cre
hvu
mac
olu
osa
osaindica
ppa
ptr
sbi
sit
sly
vvi
zma
GO:0008150
biological_process
239540
16
19139
13320
12314
6703
13130
17443
4149
20897
20100
12725
20769
15752
15660
16703
13563
17173
GO:0008152
metabolic process
180355
16
14738
9789
9213
5360
9850
12839
3338
16742
15382
9531
14950
11867
11589
12413
9926
12828
GO:0009987
cellular process
170946
16
15414
9183
8908
5364
9301
12595
3316
15317
13873
9577
14624
10343
10722
11177
9108
12124
GO:0071704
organic substance metabolic process
148279
16
13311
7925
7600
4560
8116
10579
2803
14381
12605
7814
11858
9601
9061
9957
7676
10432
GO:0044238
primary metabolic process
141004
16
12455
7521
7228
4169
7737
10099
2648
13937
12079
7344
11281
9191
8620
9473
7274
9948
GO:0044237
cellular metabolic process
132169
16
12360
6982
6828
4333
7321
9537
2644
12823
11112
7191
10598
7972
7878
8545
6755
9290
GO:0043170
macromolecule metabolic process
110131
16
9872
5772
5581
3204
6123
7599
2002
11908
9666
5403
8562
7365
6658
7423
5401
7592
GO:0044260
cellular macromolecule metabolic process
98296
16
9113
5131
5075
2922
5595
6968
1790
10575
8686
4949
7794
6098
5813
6214
4783
6790
GO:0006807
nitrogen compound metabolic process
68896
16
6565
3346
3736
2366
3937
4616
1396
8203
6389
3482
4964
4167
3825
4272
3184
4448
GO:1901360
organic cyclic compound metabolic process
65224
16
6519
3137
3525
2192
3750
4303
1274
7964
5989
3159
4769
3966
3588
4009
2939
4141
GO:0006725
cellular aromatic compound metabolic process
63827
16
6288
3066
3447
2125
3675
4232
1237
7903
5909
3081
4579
3898
3525
3936
2875
4051
GO:0034641
cellular nitrogen compound metabolic process
62637
16
6011
3011
3424
1978
3630
4166
1241
7813
5871
3047
4484
3845
3458
3880
2783
3995
GO:0046483
heterocycle metabolic process
62536
16
6006
3014
3408
1974
3623
4174
1238
7804
5849
3036
4478
3839
3449
3865
2789
3990
GO:0006139
nucleobase-containing compound metabolic process
58636
16
5551
2786
3200
1799
3413
3906
1097
7573
5556
2778
4195
3625
3224
3646
2571
3716
GO:0090304
nucleic acid metabolic process
51385
16
4789
2423
2788
1424
3099
3298
895
7134
5061
2297
3575
3224
2813
3179
2199
3187
GO:0010467
gene expression
44000
16
5325
2335
2776
911
2034
3561
891
2802
3041
2565
3702
2512
2741
3079
2264
3461
GO:0016070
RNA metabolic process
34466
16
4194
1826
2332
693
1628
2792
630
2168
2455
1810
2954
1993
2187
2400
1773
2631
GO:0043412
macromolecule modification
32462
16
3443
1903
1526
1088
1779
2407
541
2464
2670
1500
2969
2008
2111
2000
1780
2273
GO:0071840
cellular component organization or biogenesis
22985
16
4218
1192
1138
735
1142
1477
492
1354
1437
1278
1604
1448
1322
1489
1120
1539
GO:0044085
cellular component biogenesis
9141
16
1655
483
463
387
454
595
230
506
543
542
639
514
475
569
441
645
GO:0006396
RNA processing
6515
16
1076
336
355
259
297
410
273
366
405
353
450
351
331
485
341
427
GO:0034660
ncRNA metabolic process
3738
16
521
188
224
181
165
217
183
216
268
215
272
195
193
259
215
226
GO:0034470
ncRNA processing
2421
16
426
118
133
113
98
133
128
135
160
126
177
107
114
187
127
139
GO:0022613
ribonucleoprotein complex biogenesis
2020
16
495
96
104
75
76
115
75
107
107
119
136
95
93
103
95
129
GO:0042254
ribosome biogenesis
1772
16
469
82
88
69
64
100
69
91
91
99
112
80
76
88
83
111
GO:0009451
RNA modification
1670
16
449
73
90
71
66
86
78
82
118
73
109
69
71
74
73
88
GO:0016072
rRNA metabolic process
1241
16
356
56
67
65
42
55
46
67
66
58
76
50
54
61
55
67
GO:0006364
rRNA processing
1158
16
349
52
64
50
39
51
46
59
60
55
70
45
49
56
51
62
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