Anchorpoints

Gene id
VV18G06420
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G67320high expression of osmotically responsive genes 15 (HOS15); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TBP-associated factor 5 (TAIR:AT5G25150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing. WD-40 repeat family protein5+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G00750No description available.supercontig_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G05010No description available.Chr07+View
PT05G14440No description available.Chr05+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G088540WD-40 repeat family protein (AHRD V1 **-- D7MKQ9_ARALY)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch12-View
SL04G078320WD-40 repeat family protein (AHRD V1 **-- D7MKQ9_ARALY)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C regionch04-View


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Gene id
Species
Description
Chromosome
Strand