Anchorpoints

Gene id
VV10G00710
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
VV19G10770name=GSVIVG01037685001;chr19-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G11910aspartic proteinase A1 aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink). Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).1-View
AT1G62290Saposin-like aspartyl protease family protein Saposin-like aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis, lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, seedling growth, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: aspartic proteinase A1 (TAIR:AT1G11910.1); Has 7282 Blast hits to 5100 proteins in 420 species: Archae - 0; Bacteria - 6; Metazoa - 4064; Fungi - 1685; Plants - 579; Viruses - 0; Other Eukaryotes - 948 (source: NCBI BLink).1-View
AT4G04460Saposin-like aspartyl protease family protein Saposin-like aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: aspartic proteinase A1 (TAIR:AT1G11910.1); Has 6789 Blast hits to 4881 proteins in 419 species: Archae - 0; Bacteria - 8; Metazoa - 3731; Fungi - 1673; Plants - 537; Viruses - 0; Other Eukaryotes - 840 (source: NCBI BLink).4+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00152G00340No description available.supercontig_152-View
CP00087G00940No description available.supercontig_87-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G00760No description available.Chr11-View
PT04G00760No description available.Chr04+View
PT02G22830No description available.Chr02-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G032940Aspartic proteinase (AHRD V1 **-* Q8L6A8_THECC)%3B contains Interpro domain(s) IPR001461 Peptidase A1ch02-View
SL02G080880Aspartic proteinase (AHRD V1 **-* Q8L6A8_THECC)%3B contains Interpro domain(s) IPR001461 Peptidase A1ch02-View
SL07G051850Aspartic proteinase (AHRD V1 **-* Q96383_CENCA)%3B contains Interpro domain(s) IPR001461 Peptidase A1ch07+View


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