Anchorpoints

Gene id
VV08G14550
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G02310Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. proteolysis 6 proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink).5+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA06G15570CC_gene:ubr1,CC_gene:Ubr1,CC_gene:UBR1,CC_gene:UBR2,CC_gene:Ubr2,CC_gene:Ubr3,CC_gene:UBR3,CC_functional_completeness:complete,PRODUCT:zinc finger protein%2C putative%2C expressed,GO:0008270,GO:0004842,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G08570No description available.Chr06-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G10320No description available.scaffold_5+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G010830Ubiquitin ligase E3 (Fragment) (AHRD V1 *-*- Q16LM2_AEDAE)%3B contains Interpro domain(s) IPR013993 Zinc finger%2C N-recognin%2C metazoach09-View
SL10G084760Ubiquitin ligase E3 (Fragment) (AHRD V1 *-*- Q16LM2_AEDAE)%3B contains Interpro domain(s) IPR013993 Zinc finger%2C N-recognin%2C metazoach10-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G05070No description available.3-View


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Gene id
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Description
Chromosome
Strand