PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: VV08G14530
Organism: Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT2G37630	ASYMMETRIC LEAVES 1 (AS1); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 113 (TAIR:AT1G66370.1); Has 8693 Blast hits to 7877 proteins in 569 species: Archae - 0; Bacteria - 8; Metazoa - 942; Fungi - 511; Plants - 5476; Viruses - 6; Other Eukaryotes - 1750 (source: NCBI BLink). Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response. myb-like HTH transcriptional regulator family protein	2	-	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA09G03430	CC_gene:MYB104,CC_gene:MYB306,CC_gene:MYB82,CC_gene:GAM1,CC_gene:RS2,CC_gene:AS1,CC_functional_completeness:complete,PRODUCT:Transcription factor AS1,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number	chr9	-	View
MA09G29100	CC_gene:MYB82,CC_gene:MYB104,CC_gene:MYB306,CC_gene:GAM1,CC_gene:RS2,CC_gene:AS1,CC_functional_completeness:complete,PRODUCT:Transcription factor AS1,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number	chr9	+	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_12G26360	No description available.	Chr12	-	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT06G08590	No description available.	Chr06	-	View

Sorghum bicolor

Gene id	Description	Chromosome	Strand	Multiplicon
SB08G018840	No description available.	chr_8	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL09G010840	Myb family transcription factor (AHRD V1 *- D1LXI9_9ROSI)%3B contains Interpro domain(s) IPR015495 Myb transcription factor	ch09	-	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM01G27000	Protein rough sheath 2 rough sheath2;Protein rough sheath 2 (Protein PHANTASTICA)(ZmPHAN)	1	-	View