PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: VV08G11560
Organism: Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT3G10000	embryo sac development arrest 31 (EDA31); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G03680.1); Has 623 Blast hits to 458 proteins in 60 species: Archae - 1; Bacteria - 0; Metazoa - 56; Fungi - 11; Plants - 519; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). Homeodomain-like superfamily protein	3	+	View
AT5G03680	PETAL LOSS (PTL); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G10000.1); Has 1269 Blast hits to 922 proteins in 144 species: Archae - 0; Bacteria - 109; Metazoa - 238; Fungi - 32; Plants - 703; Viruses - 29; Other Eukaryotes - 158 (source: NCBI BLink). Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs. Duplicated homeodomain-like superfamily protein	5	+	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00005G00690	No description available.	supercontig_5	+	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA08G07910	CC_gene:RPI1,CC_gene:ZSCAN20,CC_gene:ZKSCAN2,CC_gene:PF13_0198,CC_gene:ZSCAN29,CC_gene:C11orf61,CC_gene:RCJMB04_32e18,CC_functional_completeness:fragment,PRODUCT:AT-GTL1%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number	chr8	-	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT10G23500	No description available.	Chr10	+	View
PT08G02560	No description available.	Chr08	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL09G009250	Trihelix transcription factor (AHRD V1 *- Q6Q6T0_ARATH)%3B contains Interpro domain(s) IPR017877 MYB-like	ch09	+	View