Anchorpoints

Gene id
VV08G01820
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
VV06G04590name=GSVIVG01025088001;chr6+View
VV13G08960name=GSVIVG01032644001;chr13+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G60100Encodes pseudo-response regulator 3 (APRR3/PRR3). PRR3 transcript levels vary in a circadian pattern with peak expression at dusk under long and short day conditions. PRR3 affects the period of the circadian clock and seedlings with reduced levels of PRR3 have shorter periods, based on transcriptional assays of clock-regulated genes. PRR3 is expressed in the vasculature of cotyledons and leaves where it may help stabilize the TOC1 protein by preventing interactions between TOC1 and the F-box protein ZTL. pseudo-response regulator 3 pseudo-response regulator 3 (PRR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 7 (TAIR:AT5G02810.1).5-View
AT5G02810pseudo-response regulator 7 PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY. pseudo-response regulator 7 (PRR7); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: pseudo-response regulator 3 (TAIR:AT5G60100.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).5-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G65910No description available.Bd1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00139G00320No description available.supercontig_139-View
CP00001G02790No description available.supercontig_1+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA09G04360CC_gene:APRR9,CC_gene:APRR5,CC_gene:APRR3,CC_gene:APRR7,CC_gene:PRR37,CC_gene:PRR73,CC_functional_completeness:complete,PRODUCT:Two-component response regulator-like PRR73,GO:0000160,GO:0000156,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr9-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G17570Two-component response regulator-like PRR73 response regulator receiver domain containing protein, expressed3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G16160No description available.Chr03-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G04620No description available.Chr08+View
PT10G21520No description available.Chr10-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G038820No description available.chr_1+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G45880No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G086000Pseudo-response regulator 7 (AHRD V1 ***- D0PPG7_CASSA)%3B contains Interpro domain(s) IPR001789 Signal transduction response regulator%2C receiver regionch10-View
SL04G049670Pseudo response regulator (AHRD V1 ***- B9HM08_POPTR)%3B contains Interpro domain(s) IPR010402 CCT domainch04-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G23410No description available.9+View


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Gene id
Species
Description
Chromosome
Strand