Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- VV07G08750
- Organism
- Vitis vinifera
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV14G09160 | name=GSVIVG01031185001; | chr14 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G47510 | fumarase 1 Encodes a mitochondrial-localized protein. The FUM1 gene appears to be essential, suggesting that FUM1 may play a crucial role as a fumarase in the tricarboxylic acid cycle. fumarase 1 (FUM1); FUNCTIONS IN: fumarate hydratase activity, protein binding; INVOLVED IN: response to oxidative stress, response to salt stress, pollen tube development; LOCATED IN: mitochondrion; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Fumarate hydratase, class II (InterPro:IPR005677), L-Aspartase-like (InterPro:IPR008948), Fumarate lyase, conserved site (InterPro:IPR020557), Lyase 1, N-terminal (InterPro:IPR022761), Fumarase C, C-terminal (InterPro:IPR018951), Fumarate lyase (InterPro:IPR000362); BEST Arabidopsis thaliana protein match is: FUMARASE 2 (TAIR:AT5G50950.2); Has 19736 Blast hits to 19727 proteins in 2822 species: Archae - 389; Bacteria - 12991; Metazoa - 306; Fungi - 295; Plants - 106; Viruses - 0; Other Eukaryotes - 5649 (source: NCBI BLink). | 2 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00151G00370 | No description available. | supercontig_151 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS03G21950 | fumarate hydratase, mitochondrial precursor, putative, expressed | 3 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT02G20130 | No description available. | Chr02 | + | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI009G42370 | No description available. | scaffold_9 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G009820 | Fumarate hydratase class II (AHRD V1 ***- C5JMG3_AJEDS)%3B contains Interpro domain(s) IPR000362 Fumarate lyase | ch06 | + | View |
| SL09G075450 | Fumarate hydratase class II (AHRD V1 ***- C5GAL1_AJEDR)%3B contains Interpro domain(s) IPR005677 Fumarate hydratase%2C class II | ch09 | - | View |