Anchorpoints

Gene id
VV05G05470
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G14690Encodes an early light-induced protein. ELIPs are thought not to be directly involved in the synthesis and assembly of specific photosynthetic complexes, but rather affect the biogenesis of all chlorophyll-binding complexes. A study (PMID 17553115) has shown that the chlorophyll synthesis pathway was downregulated as a result of constitutive ELIP2 expression, leading to decreased chlorophyll availability for the assembly of pigment-binding proteins for photosynthesis. EARLY LIGHT-INDUCIBLE PROTEIN 2 (ELIP2); BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT3G22840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Chlorophyll A-B binding family protein4+View
AT3G22840Encodes an early light-inducible protein. Chlorophyll A-B binding family protein EARLY LIGHT-INDUCABLE PROTEIN (ELIP1); BEST Arabidopsis thaliana protein match is: Chlorophyll A-B binding family protein (TAIR:AT4G14690.1); Has 319 Blast hits to 319 proteins in 50 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 259; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).3-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G55560No description available.Bd1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00044G01220No description available.supercontig_44-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA08G21060CC_gene:hemH,CC_gene:CBR,CC_gene:DSP-22,CC_functional_completeness:modules,PRODUCT:Early light-induced protein%2C chloroplastic,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G08150early light-induced protein, chloroplast precursor, putative, expressed7+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_07G06420No description available.Chr07+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G15780No description available.Chr08-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB02G004380No description available.chr_2-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI002G05110No description available.scaffold_2-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G082690Early light-induced protein 7 (AHRD V1 ***- B2BJD6_RHOCT)ch09-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G02950early light-inducible protein ELIP (LOC541918), mRNA7+View


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Gene id
Species
Description
Chromosome
Strand