Anchorpoints

Gene id
VV05G05140
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G22590Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP), a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway, and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts, and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes that included the flowering repressor FLOWERING LOCUS C (FLC). PLANT HOMOLOGOUS TO PARAFIBROMIN PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP); CONTAINS InterPro DOMAIN/s: RNA polymerase II accessory factor, Cdc73 (InterPro:IPR007852); Has 502 Blast hits to 395 proteins in 198 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 127; Plants - 42; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).3+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00058G00780No description available.supercontig_58-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA09G10800CC_gene:VPS52,CC_gene:PARP1,CC_gene:cdc73,CC_gene:Cdc73,CC_gene:CDC73,CC_functional_completeness:complete,PRODUCT:parafibromin%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr9+View
MA08G20920CC_gene:mutS,CC_gene:thr,CC_gene:cdc73,CC_gene:CDC73,CC_gene:Cdc73,CC_functional_completeness:complete,PRODUCT:parafibromin%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G15500No description available.Chr08+View
PT10G08550No description available.Chr10-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G054080RNA polymerase II accessory factor Cdc73 family (AHRD V1 **-- B6JZW2_SCHJY)%3B contains Interpro domain(s) IPR007852 RNA polymerase II accessory factor%2C Cdc73ch06-View


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Gene id
Species
Description
Chromosome
Strand