Anchorpoints

Gene id
VV04G02390
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G36650plant-specific TFIIB-related protein Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus. plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1560 Blast hits to 1559 proteins in 341 species: Archae - 524; Bacteria - 1; Metazoa - 239; Fungi - 259; Plants - 166; Viruses - 3; Other Eukaryotes - 368 (source: NCBI BLink).4-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G02760No description available.Chr07-View
PT05G12490No description available.Chr05-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G085470Transcription initiation factor IIB (AHRD V1 *-*- B5XD83_SALSA)%3B contains Interpro domain(s) IPR000812 Transcription factor TFIIB relatedch02-View


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Description
Chromosome
Strand