PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: VV04G02120
Organism: Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT4G36620	GATA transcription factor 19 GATA transcription factor 19 (GATA19); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA type zinc finger transcription factor family protein (TAIR:AT3G50870.1); Has 2155 Blast hits to 2054 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 386; Fungi - 885; Plants - 786; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). Encodes a member of the GATA factor family of zinc finger transcription factors.	4	-	View
AT2G18380	GATA transcription factor 20 (GATA20); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). GATA transcription factor 20 Encodes a member of the GATA factor family of zinc finger transcription factors.	2	-	View
AT3G50870	GATA type zinc finger transcription factor family protein MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). Encodes a GATA transcriptional regulator required to position the proembryo boundary in the early embryo. Regulates shoot apical meristem and flower development.	3	+	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00006G01150	No description available.	supercontig_6	-	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA07G26230	CC_gene:GATA23,CC_gene:gtaL,CC_gene:GATA29,CC_gene:GATA22,CC_gene:GATA21,CC_gene:GATA19,CC_gene:GATA18,CC_gene:GATA20,CC_functional_completeness:complete,PRODUCT:Putative GATA zinc finger domain containing protein,GO:0043565,GO:0008270,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number	chr7	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS05G50270	GATA zinc finger domain containing protein, expressed	5	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT07G02450	No description available.	Chr07	-	View
PT05G12270	No description available.	Chr05	-	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI003G13430	No description available.	scaffold_3	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL02G085190	GATA transcription factor 19 (AHRD V1 -* B6TS85_MAIZE)%3B contains Interpro domain(s) IPR000679 Zinc finger%2C GATA-type	ch02	-	View
SL02G062760	GATA transcription factor 19 (AHRD V1 -* B6TS85_MAIZE)%3B contains Interpro domain(s) IPR000679 Zinc finger%2C GATA-type	ch02	+	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM08G11260	No description available.	8	-	View