Anchorpoints

Gene id
VV03G08400
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G34460GTP binding protein beta 1 GTP binding protein beta 1 (AGB1); FUNCTIONS IN: protein binding, GTPase activity, nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: endoplasmic reticulum, plasma membrane, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), Guanine nucleotide-binding protein, beta subunit (InterPro:IPR016346), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), G-protein, beta subunit (InterPro:IPR001632), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT5G67320.1); Has 60281 Blast hits to 28762 proteins in 834 species: Archae - 58; Bacteria - 8505; Metazoa - 23635; Fungi - 12687; Plants - 7683; Viruses - 0; Other Eukaryotes - 7713 (source: NCBI BLink). Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. It seems to be involved in the calcium-mediated response to extracellular ATP.4-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00062G01370No description available.supercontig_62-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G11530No description available.Chr09-View
PT04G15370No description available.Chr04-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G109560Guanine nucleotide-binding protein subunit beta (AHRD V1 ***- C1GED5_PARBD)%3B contains Interpro domain(s) IPR016346 Guanine nucleotide-binding protein%2C beta subunitch01-View


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