PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: VV02G07500
Organism: Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT4G11920	cell cycle switch protein 52 A2 Encodes a putative activator of the anaphase-promoting complex/cyclosome. Promotes exit from the cell cycle and entry into the endocycle leading to endoreduplication. Mutation of this gene results in abnormal shoot apical meristem development. It likely regulates the development of meristems by indirectly interacting with WUS and CLV3. cell cycle switch protein 52 A2 (CCS52A2); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: FIZZY-related 2 (TAIR:AT4G22910.1); Has 45928 Blast hits to 23758 proteins in 696 species: Archae - 56; Bacteria - 7022; Metazoa - 17569; Fungi - 10333; Plants - 5514; Viruses - 0; Other Eukaryotes - 5434 (source: NCBI BLink).	4	-	View
AT4G22910	FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink). FIZZY-related 2	4	+	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00029G00350	No description available.	supercontig_29	-	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA11G22100	CC_gene:mfr1,CC_gene:srw1,CC_gene:cdh1,CC_gene:Fzr1,CC_gene:FZR3,CC_gene:FZR1,CC_gene:FZR2,CC_functional_completeness:complete,PRODUCT:Protein FIZZY-RELATED 2,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number	chr11	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT01G11270	No description available.	Chr01	-	View
PT03G11950	No description available.	Chr03	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL08G080080	WD-repeat cell cycle regulatory protein (AHRD V1 **-- Q9M7I2_MEDTR)%3B contains Interpro domain(s) IPR017986 WD40 repeat%2C region	ch08	+	View