Anchorpoints
- Gene id
- VV01G07530
- Organism
- Vitis vinifera
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G07940 | name=GSVIVG01031007001; | chr14 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G68360 | C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 6 (TAIR:AT1G67030.1); Has 1137 Blast hits to 1135 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 1124; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). C2H2 and C2HC zinc fingers superfamily protein | 1 | - | View |
AT1G67030 | zinc finger protein 6 Encodes a novel C2H2 zinc finger protein containing only a single zinc finger which plays a key role in regulating trichome development by integrating GA and cytokinin signaling. zinc finger protein 6 (ZFP6); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: cytosolic ribosome; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G68360.1); Has 1119 Blast hits to 1119 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 1114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 1 | + | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD2G02190 | No description available. | Bd2 | - | View |
BD1G69820 | No description available. | Bd1 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00065G00470 | No description available. | supercontig_65 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA08G32420 | CC_gene:KNU,CC_gene:RBE,CC_gene:ZFP4,CC_gene:ZFP3,CC_gene:ZFP1,CC_gene:ZFP7,CC_gene:ZFP5,CC_gene:ZFP6,CC_functional_completeness:complete,PRODUCT:Putative Whole genome shotgun sequence of line PN40024%2C scaffold_11.assembly12x (Fragment),GO:0008270,GO:0005622,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr8 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_01G03520 | No description available. | Chr01 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G12310 | No description available. | Chr08 | - | View |
PT04G09790 | No description available. | Chr04 | + | View |
PT17G11630 | No description available. | Chr17 | - | View |
PT10G12240 | No description available. | Chr10 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB03G007120 | No description available. | chr_3 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL05G009180 | Zinc finger protein 6 (AHRD V1 ***- B6T066_MAIZE)%3B contains Interpro domain(s) IPR007087 Zinc finger%2C C2H2-type | ch05 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM08G03110 | No description available. | 8 | + | View |