Anchorpoints

Gene id
VV01G01110
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
VV17G08960name=GSVIVG01008640001;chr17+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G13300ARF GTPase-activating protein SCARFACE (SFC); FUNCTIONS IN: ARF GTPase activator activity, phosphoinositide binding; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, phloem or xylem histogenesis, leaf morphogenesis; LOCATED IN: cytosol, trans-Golgi network transport vesicle, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 1 (TAIR:AT5G61980.1); Has 64753 Blast hits to 27558 proteins in 1221 species: Archae - 110; Bacteria - 5131; Metazoa - 34265; Fungi - 4887; Plants - 2591; Viruses - 654; Other Eukaryotes - 17115 (source: NCBI BLink). Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00013G01480No description available.supercontig_13-View
CP00038G00810No description available.supercontig_38+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS08G42530SFC, putative, expressed8-View
OS09G33600ARF GTPase-activating domain-containing protein, putative, expressed9-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_09G26830No description available.Chr09-View
OSINDICA_08G41060No description available.Chr08-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G06680No description available.Chr01-View
PT03G16320No description available.Chr03+View
PT15G10550No description available.Chr15-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB07G025880No description available.chr_7+View
SB02G029540No description available.chr_2-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI006G22690No description available.scaffold_6-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G118260Arf-GAP with GTPase%2C ANK repeat and PH domain-containing protein 3 (AHRD V1 *--- AGAP3_MOUSE)%3B contains Interpro domain(s) IPR001164 Arf GTPase activating proteinch03+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G34190No description available.1-View
ZM07G18390No description available.7-View


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Gene id
Species
Description
Chromosome
Strand