Anchorpoints
- Gene id
- SL10G084760
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G010830 | Ubiquitin ligase E3 (Fragment) (AHRD V1 *-*- Q16LM2_AEDAE)%3B contains Interpro domain(s) IPR013993 Zinc finger%2C N-recognin%2C metazoa | ch09 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G02310 | Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. proteolysis 6 proteolysis 6 (PRT6); CONTAINS InterPro DOMAIN/s: Zinc finger, N-recognin, metazoa (InterPro:IPR013993), Zinc finger, N-recognin (InterPro:IPR003126); Has 1893 Blast hits to 778 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 577; Plants - 100; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink). | 5 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA06G15570 | CC_gene:ubr1,CC_gene:Ubr1,CC_gene:UBR1,CC_gene:UBR2,CC_gene:Ubr2,CC_gene:Ubr3,CC_gene:UBR3,CC_functional_completeness:complete,PRODUCT:zinc finger protein%2C putative%2C expressed,GO:0008270,GO:0004842,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr6 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G08570 | No description available. | Chr06 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV08G14550 | name=GSVIVG01034169001; | chr8 | - | View |