Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL10G085180PHD finger family protein (AHRD V1 **-- D7LYZ0_ARALY)%3B contains Interpro domain(s) IPR019787 Zinc finger%2C PHD-fingerch10+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G11200Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 2 (AL2); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 1 (TAIR:AT5G05610.2); Has 1527 Blast hits to 1482 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 758; Fungi - 235; Plants - 458; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). alfin-like 23-View
AT5G05610alfin-like 1 alfin-like 1 (AL1); CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Protein of unknown function DUF3594 (InterPro:IPR021998), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: alfin-like 2 (TAIR:AT3G11200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7).5-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA10G23530CC_gene:JHDM1D,CC_gene:nurf-1,CC_gene:Jhdm1d,CC_gene:jhdm1da,CC_gene:phf8,CC_gene:BPTF,CC_gene:E(bx),CC_gene:At5g26210,CC_functional_completeness:complete,PRODUCT:PHD finger protein At5g26210,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10+View
MA02G19410CC_gene:PHF8,CC_gene:JHDM1D,CC_gene:Jhdm1d,CC_gene:jhdm1da,CC_gene:phf8,CC_gene:BPTF,CC_gene:E(bx),CC_gene:At5g26210,CC_functional_completeness:complete,PRODUCT:PHD finger protein At5g26210,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr2-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G06540PHD finger protein, putative, expressed1-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G06110No description available.Chr01-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G18810No description available.Chr10-View
PT16G11690No description available.Chr16+View
PT08G06920No description available.Chr08+View
PT06G10090No description available.Chr06+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G11220No description available.scaffold_5-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G00320name=GSVIVG01011162001;chr8+View
VV13G10380name=GSVIVG01032811001;chr13+View


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Gene id
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Description
Chromosome
Strand