Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G04400Blue light receptor mediating blue-light regulated cotyledon expansion and flowering time. Positive regulator of the flowering-time gene CONSTANS. This gene possesses a light-induced CNT2 N-terminal homodimerisation domain.Involved in blue-light induced stomatal opening. Involved in triggering chromatin decondensation. An 80-residue motif (NC80) is sufficient to confer CRY2's physiological function. It is proposed that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a 'closed' conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an 'open' conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses. Cry2 phosphorylation and degradation both occur in the nucleus. cryptochrome 2 cryptochrome 2 (CRY2); FUNCTIONS IN: protein homodimerization activity, blue light photoreceptor activity; INVOLVED IN: in 9 processes; LOCATED IN: nucleus, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal (InterPro:IPR018394), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome, plant (InterPro:IPR014134), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: cryptochrome 1 (TAIR:AT4G08920.1); Has 10129 Blast hits to 10113 proteins in 1516 species: Archae - 99; Bacteria - 3201; Metazoa - 386; Fungi - 148; Plants - 723; Viruses - 2; Other Eukaryotes - 5570 (source: NCBI BLink).1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00044G00590No description available.supercontig_44+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G41550FAD binding domain of DNA photolyase domain containing protein, expressed2+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G39830No description available.Chr02+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G07120No description available.Chr10+View
PT08G16660No description available.Chr08-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G08200name=GSVIVG01027806001;chr5-View


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Description
Chromosome
Strand