Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL01G079680Ran GTPase activating protein (Fragment) (AHRD V1 **-* A7M8K5_NICBE)%3B contains Interpro domain(s) IPR003590 Leucine-rich repeat%2C ribonuclease inhibitor subtypech01+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G63130Encodes a RAN GTPase activating protein involved in nuclear import, cell plate formation and mitotic spindle formation. RAN GTPase activating protein 1 RAN GTPase activating protein 1 (RANGAP1); FUNCTIONS IN: RAN GTPase activator activity; INVOLVED IN: M phase specific microtubule process, protein import into nucleus, cytokinesis; LOCATED IN: nuclear envelope, plasma membrane, chloroplast, cell division site, cell plate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 2 (TAIR:AT5G19320.1); Has 11260 Blast hits to 5482 proteins in 299 species: Archae - 0; Bacteria - 610; Metazoa - 5101; Fungi - 238; Plants - 692; Viruses - 0; Other Eukaryotes - 4619 (source: NCBI BLink).3+View
AT5G19320Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase. RAN GTPase activating protein 2 RAN GTPase activating protein 2 (RANGAP2); FUNCTIONS IN: RAN GTPase activator activity; INVOLVED IN: response to salt stress, nucleocytoplasmic transport; LOCATED IN: nuclear envelope, endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00370G00060No description available.supercontig_370-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G05290No description available.Chr02+View
PT05G20960No description available.Chr05-View
PT10G09110No description available.Chr10+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G04490name=GSVIVG01017922001;chr5-View
VV07G04530name=GSVIVG01011081001;chr7-View


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Gene id
Species
Description
Chromosome
Strand