Anchorpoints
- Gene id
- SL09G065190
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G079680 | Ran GTPase activating protein (Fragment) (AHRD V1 **-* A7M8K5_NICBE)%3B contains Interpro domain(s) IPR003590 Leucine-rich repeat%2C ribonuclease inhibitor subtype | ch01 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G63130 | Encodes a RAN GTPase activating protein involved in nuclear import, cell plate formation and mitotic spindle formation. RAN GTPase activating protein 1 RAN GTPase activating protein 1 (RANGAP1); FUNCTIONS IN: RAN GTPase activator activity; INVOLVED IN: M phase specific microtubule process, protein import into nucleus, cytokinesis; LOCATED IN: nuclear envelope, plasma membrane, chloroplast, cell division site, cell plate; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 2 (TAIR:AT5G19320.1); Has 11260 Blast hits to 5482 proteins in 299 species: Archae - 0; Bacteria - 610; Metazoa - 5101; Fungi - 238; Plants - 692; Viruses - 0; Other Eukaryotes - 4619 (source: NCBI BLink). | 3 | + | View |
AT5G19320 | Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase. RAN GTPase activating protein 2 RAN GTPase activating protein 2 (RANGAP2); FUNCTIONS IN: RAN GTPase activator activity; INVOLVED IN: response to salt stress, nucleocytoplasmic transport; LOCATED IN: nuclear envelope, endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RAN GTPase activating protein 1 (TAIR:AT3G63130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00370G00060 | No description available. | supercontig_370 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G05290 | No description available. | Chr02 | + | View |
PT05G20960 | No description available. | Chr05 | - | View |
PT10G09110 | No description available. | Chr10 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV05G04490 | name=GSVIVG01017922001; | chr5 | - | View |
VV07G04530 | name=GSVIVG01011081001; | chr7 | - | View |