Expansion plot
Gene family finder
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Synteny plot
WGDotplot
Functional clusters
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BLAST
WorkbenchAnchorpoints
- Gene id
- SL09G008770
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G53040 | late embryogenesis abundant protein, putative / LEA protein, putative late embryogenesis abundant protein, putative / LEA protein, putative; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: seed; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: embryonic cell protein 63 (TAIR:AT2G36640.1); Has 58153 Blast hits to 33178 proteins in 2866 species: Archae - 714; Bacteria - 20429; Metazoa - 14816; Fungi - 4800; Plants - 4772; Viruses - 420; Other Eukaryotes - 12202 (source: NCBI BLink). | 3 | - | View |
| AT2G36640 | embryonic cell protein 63 (ECP63); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit, seed; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein, putative / LEA protein, putative (TAIR:AT3G53040.1); Has 29213 Blast hits to 16834 proteins in 2229 species: Archae - 326; Bacteria - 11175; Metazoa - 5508; Fungi - 2029; Plants - 3175; Viruses - 194; Other Eukaryotes - 6806 (source: NCBI BLink). Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2. embryonic cell protein 63 | 2 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00005G01060 | No description available. | supercontig_5 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV08G11160 | name=GSVIVG01033739001; | chr8 | - | View |