Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL10G00817026S proteasome regulatory subunit (AHRD V1 ***- C6HL17_AJECH)ch10+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G20580encoding the RPN subunits of the 26S proteasome 26S proteasome regulatory subunit S2 1A 26S proteasome regulatory subunit S2 1A (RPN1A); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Armadillo-type fold (InterPro:IPR016024), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink).2+View
AT4G2847026S proteasome regulatory subunit S2 1B (RPN1B); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1A (TAIR:AT2G20580.1); Has 1017 Blast hits to 967 proteins in 297 species: Archae - 0; Bacteria - 10; Metazoa - 372; Fungi - 296; Plants - 141; Viruses - 0; Other Eukaryotes - 198 (source: NCBI BLink). 26S proteasome regulatory subunit S2 1B encoding the RPN subunits of the 26S proteasome4-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT00G00300No description available.scaffold_139-View
PT07G13720No description available.Chr07+View
PT17G01480No description available.Chr17-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G02010name=GSVIVG01020602001;chr12+View


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Description
Chromosome
Strand