Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL03G114830MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY)%3B contains Interpro domain(s) IPR002487 Transcription factor%2C K-boxch03-View
SL04G005320MADS-box transcription factor (AHRD V1 **** Q8S4L4_SOLLC)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-boxch04-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G69120K-box region and MADS-box transcription factor family protein APETALA1 (AP1); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G26310.1); Has 8031 Blast hits to 8015 proteins in 981 species: Archae - 10; Bacteria - 56; Metazoa - 785; Fungi - 329; Plants - 6623; Viruses - 2; Other Eukaryotes - 226 (source: NCBI BLink). Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.1-View
AT1G26310Floral homeotic gene encoding a MADS domain protein homologous to AP1. Enhances the flower to shoot transformation in ap1 mutants. K-box region and MADS-box transcription factor family protein CAULIFLOWER (CAL); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, floral meristem determinacy; LOCATED IN: nucleus; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 8035 Blast hits to 8024 proteins in 979 species: Archae - 8; Bacteria - 30; Metazoa - 829; Fungi - 313; Plants - 6634; Viruses - 0; Other Eukaryotes - 221 (source: NCBI BLink).1-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA04G24190CC_gene:AGL8,CC_gene:MADS15,CC_gene:SCM1,CC_gene:MADS18,CC_gene:MADS14,CC_functional_completeness:complete,PRODUCT:MADS-box transcription factor 14,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT12G06230No description available.Chr12+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G04850name=GSVIVG01008140001;chr17-View


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Gene id
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Description
Chromosome
Strand