Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G13400Along with JAG, it is involved in stamen and carpel development. Expression is limited to the adaxial side of lateral organs. Activated by AGAMOUS in a cal-1, ap1-1 background. NUBBIN (NUB); FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: stamen development, anther development, carpel development; LOCATED IN: intracellular; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G68480.1); Has 743 Blast hits to 743 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 739; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). C2H2 and C2HC zinc fingers superfamily protein1+View
AT1G68480C2H2 and C2HC zinc fingers superfamily protein Encodes a putative zinc finger transcription factor that is necessary for proper lateral organ shape and is sufficient to induce the proliferation of lateral organ tissue. Together with NUB, it is involved in stamen and carpel development. JAGGED (JAG); CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT1G13400.1); Has 723 Blast hits to 723 proteins in 72 species: Archae - 0; Bacteria - 6; Metazoa - 56; Fungi - 19; Plants - 626; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).1-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G02020No description available.Bd2-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA02G23280No description available.chr2+View
MA10G20330CC_gene:RBE,CC_gene:SUP,CC_gene:ZFP3,CC_gene:ZFP1,CC_gene:ZFP2,CC_gene:ZFP6,CC_gene:ZFP4,CC_gene:ZFP7,CC_functional_completeness:fragment,PRODUCT:Putative ZOS1-02 - C2H2 zinc finger protein%2C expressed,GO:0008270,GO:0005622,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10+View
MA01G21780CC_gene:ZFP2,CC_gene:SUP,CC_gene:ZFP1,CC_gene:ZFP7,CC_gene:RBE,CC_gene:ZFP4,CC_gene:KNU,CC_gene:ZFP6,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0008270,GO:0005622,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G03840ZOS1-02 - C2H2 zinc finger protein, expressed Zinc finger protein STAMENLESS 11+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G03180No description available.Chr01+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G12420No description available.Chr10-View
PT08G12120No description available.Chr08+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G007290No description available.chr_3-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G08970No description available.scaffold_5+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G07690name=GSVIVG01011890001;chr1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G06210JAG3-View
ZM08G02910No description available.8+View


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Gene id
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Description
Chromosome
Strand