Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL02G0850402%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase (AHRD V1 *--- DAPH_CLOBH)%3B contains Interpro domain(s) IPR011004 Trimeric LpxA-likech02-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G19580gamma carbonic anhydrase 1 Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex. gamma carbonic anhydrase 1 (GAMMA CA1); FUNCTIONS IN: carbonate dehydratase activity; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 2 (TAIR:AT1G47260.1); Has 10894 Blast hits to 10839 proteins in 2210 species: Archae - 265; Bacteria - 7962; Metazoa - 13; Fungi - 83; Plants - 197; Viruses - 0; Other Eukaryotes - 2374 (source: NCBI BLink).1+View
AT1G47260gamma carbonic anhydrase 2 (GAMMA CA2); FUNCTIONS IN: carbonate dehydratase activity; INVOLVED IN: response to salt stress, regulation of oxygen and reactive oxygen species metabolic process, anther dehiscence, photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase 1 (TAIR:AT1G19580.1); Has 12062 Blast hits to 12006 proteins in 2273 species: Archae - 302; Bacteria - 8576; Metazoa - 53; Fungi - 108; Plants - 233; Viruses - 0; Other Eukaryotes - 2790 (source: NCBI BLink). gamma carbonic anhydrase 2 Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G12080No description available.Chr05-View
PT05G22900No description available.Chr05+View
PT02G03410No description available.Chr02-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G01900name=GSVIVG01018929001;chr4+View
VV18G09130name=GSVIVG01009735001;chr18+View


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Gene id
Species
Description
Chromosome
Strand