Anchorpoints

Gene id
SL04G076880
Organism
Solanum lycopersicum

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL12G088160Phosphoenolpyruvate carboxykinase (AHRD V1 ***- Q8W505_SOLLC)%3B contains Interpro domain(s) IPR001272 Phosphoenolpyruvate carboxykinase%2C ATP-utilisingch12+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G65690Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent). phosphoenolpyruvate carboxykinase 2 (PCK2); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: gluconeogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, male gametophyte, root, flower, trichome; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 1 (TAIR:AT4G37870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). phosphoenolpyruvate carboxykinase 25+View
AT4G37870phosphoenolpyruvate carboxykinase 1 Encodes a phosphoenolpyruvate carboxykinase that localizes to the cytosol. phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink).4-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00160G00020No description available.supercontig_160+View
CP00129G00270No description available.supercontig_129+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G10770No description available.Chr02-View


Download

Gene id
Species
Description
Chromosome
Strand