Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- SL04G076040
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL12G087900 | Cyclin d2 (AHRD V1 ***- Q6T2Z7_SOYBN)%3B contains Interpro domain(s) IPR015451 Cyclin D | ch12 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G65420 | CYCLIN D4;1 (CYCD4;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin d4;2 (TAIR:AT5G10440.1). CYCLIN D4;1 Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl. | 5 | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD3G58300 | No description available. | Bd3 | + | View |
| BD3G38417 | No description available. | Bd3 | + | View |
| BD4G32556 | No description available. | Bd4 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00055G00360 | No description available. | supercontig_55 | - | View |
| CP00309G00080 | No description available. | supercontig_309 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA10G25530 | CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD3-1,CC_gene:CYCD4-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D4-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr10 | - | View |
| MA09G15450 | CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr9 | - | View |
| MA06G10520 | CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD4-2,CC_gene:CYCD2-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Putative Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr6 | + | View |
| MA03G06820 | CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD4-2,CC_gene:CYCD2-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | - | View |
| MA10G31020 | CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr10 | + | View |
| MA06G02240 | CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD4-2,CC_gene:CYCD2-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:fragment,PRODUCT:Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr6 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS09G29100 | cyclin, putative, expressed Cyclin-D4-1 | 9 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_09G23310 | No description available. | Chr09 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT05G15780 | No description available. | Chr05 | + | View |
| PT02G10350 | No description available. | Chr02 | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB04G033870 | No description available. | chr_4 | - | View |
| SB02G027020 | No description available. | chr_2 | + | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI002G24250 | No description available. | scaffold_2 | + | View |
| SI006G18490 | No description available. | scaffold_6 | + | View |
| SI001G34080 | No description available. | scaffold_1 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV18G04300 | name=GSVIVG01009139001; | chr18 | - | View |
| VV00G06850 | name=GSVIVG01003610001; | chrUn | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM07G16590 | cyclin delta-2 | 7 | + | View |
| ZM02G31970 | D-type cyclin Fragment | 2 | + | View |
| ZM04G27270 | LOC541915 | 4 | + | View |