Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- SL03G113710
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL05G006430 | Formin 3 (AHRD V1 *-*- D0QAN4_ARATH)%3B contains Interpro domain(s) IPR015425 Actin-binding FH2 | ch05 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G59910 | Actin-binding FH2 (formin homology 2) family protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin 8 (TAIR:AT1G70140.1); Has 156785 Blast hits to 84417 proteins in 2586 species: Archae - 222; Bacteria - 29191; Metazoa - 66130; Fungi - 20882; Plants - 16945; Viruses - 3579; Other Eukaryotes - 19836 (source: NCBI BLink). Actin-binding FH2 (formin homology 2) family protein | 1 | - | View |
| AT1G24150 | formin homologue 4 (FH4); FUNCTIONS IN: actin binding, protein binding; INVOLVED IN: actin filament polymerization; LOCATED IN: cell-cell junction, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin 8 (TAIR:AT1G70140.1); Has 28239 Blast hits to 15205 proteins in 945 species: Archae - 44; Bacteria - 3418; Metazoa - 10057; Fungi - 3019; Plants - 7022; Viruses - 1317; Other Eukaryotes - 3362 (source: NCBI BLink). formin homologue 4 Encodes a group I formin. Localized to cell junctions. Polymerizes actin. Binds profilin. | 1 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00035G00180 | No description available. | supercontig_35 | - | View |
| CP00005G03220 | No description available. | supercontig_5 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_02G48820 | No description available. | Chr02 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT15G06980 | No description available. | Chr15 | - | View |
| PT10G03790 | No description available. | Chr10 | + | View |
| PT08G19290 | No description available. | Chr08 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV17G02450 | name=GSVIVG01007836001; | chr17 | - | View |
| VV01G13260 | name=GSVIVG01020145001; | chr1 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM05G39780 | No description available. | 5 | - | View |