Anchorpoints
- Gene id
- SL02G092330
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G064640 | ADP-RIBOSYLATION FACTOR-like protein (AHRD V1 ***- Q8VY57_ARATH)%3B contains Interpro domain(s) IPR006688 ADP-ribosylation factor | ch02 | - | View |
SL03G043960 | ADP-ribosylation factor-like protein (AHRD V1 ***- Q93Y31_ARATH)%3B contains Interpro domain(s) IPR006688 ADP-ribosylation factor | ch03 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G49860 | A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. ADP-ribosylation factor-like A1B ADP-ribosylation factor-like A1B (ARLA1B); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport, protein transport, small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: hypocotyl, male gametophyte, root, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), Ras small GTPase, Ras type (InterPro:IPR003577), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1C (TAIR:AT3G49870.1); Has 16899 Blast hits to 16895 proteins in 575 species: Archae - 10; Bacteria - 254; Metazoa - 7961; Fungi - 2407; Plants - 2569; Viruses - 3; Other Eukaryotes - 3695 (source: NCBI BLink). | 3 | - | View |
AT5G67560 | A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. Possible pseudogene because it lacks an N-terminal part that is conserved among the other ARL8 proteins. ADP-ribosylation factor-like A1D (ARLA1D); FUNCTIONS IN: GTP binding; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1C (TAIR:AT3G49870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ADP-ribosylation factor-like A1D | 5 | + | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD1G71170 | No description available. | Bd1 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00006G00130 | No description available. | supercontig_6 | - | View |
CP00106G00410 | No description available. | supercontig_106 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA08G31720 | CC_gene:arl8ba,CC_gene:ARL8A,CC_gene:ARL8B,CC_gene:Arl8b,CC_functional_completeness:complete,PRODUCT:ADP-ribosylation factor-like protein 8B,GO:0015031,GO:0007264,GO:0006886,GO:0005622,GO:0005525,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr8 | + | View |
MA01G23350 | CC_gene:ARL8A,CC_gene:arl8ba,CC_gene:ARL8B,CC_gene:Arl8b,CC_functional_completeness:complete,PRODUCT:ADP-ribosylation factor-like protein 8B,GO:0015031,GO:0007264,GO:0006886,GO:0005622,GO:0005525,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr1 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS03G10370 | ADP-ribosylation factor, putative, expressed | 3 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_03G08860 | No description available. | Chr03 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT09G08740 | No description available. | Chr09 | - | View |
PT01G29310 | No description available. | Chr01 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB01G043820 | No description available. | chr_1 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI009G51820 | No description available. | scaffold_9 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV03G09740 | name=GSVIVG01037822001; | chr3 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM09G26530 | No description available. | 9 | + | View |
ZM01G07150 | ADP-ribosylation factor-like protein 8B | 1 | + | View |