Anchorpoints

Gene id
SL02G078210
Organism
Solanum lycopersicum

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL07G053960Ubiquitin-conjugating enzyme 23 (AHRD V1 *-*- D7L425_ARALY)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2ch07+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G15355ubiquitin-conjugating enzyme 25 ubiquitin-conjugating enzyme 25 (UBC25); FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G53025.1); Has 6168 Blast hits to 6144 proteins in 365 species: Archae - 0; Bacteria - 0; Metazoa - 2619; Fungi - 1243; Plants - 1332; Viruses - 17; Other Eukaryotes - 957 (source: NCBI BLink).3+View
AT2G33770phosphate 2 (PHO2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 23 (TAIR:AT2G16920.1); Has 6405 Blast hits to 6302 proteins in 368 species: Archae - 0; Bacteria - 0; Metazoa - 2716; Fungi - 1263; Plants - 1493; Viruses - 17; Other Eukaryotes - 916 (source: NCBI BLink). Encodes a ubiquitin-conjugating E2 enzyme. UBC24 mRNA accumulation is suppressed by miR399f, miR399b and miR399c. Involved in phosphate starvation response. phosphate 22-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00080G00590No description available.supercontig_80-View
CP00027G00240No description available.supercontig_27-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G48580ubiquitin-conjugating enzyme E2, putative, expressed1+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G45980No description available.Chr01+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G05260No description available.Chr11-View
PT11G11880No description available.Chr11-View
PT01G40030No description available.Chr01+View
PT04G04350No description available.Chr04-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G031060No description available.chr_3+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV00G12410name=GSVIVG01005206001;chrUn-View
VV12G01570name=GSVIVG01020551001;chr12+View
VV19G02980name=GSVIVG01014343001;chr19+View


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Gene id
Species
Description
Chromosome
Strand