Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL07G053610Homeobox protein (AHRD V1 *--- D6BV21_ORYSJ)%3B contains Interpro domain(s) IPR018500 DDT subgroupch07+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G28420homeobox-1 (HB-1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). homeobox-11+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G16647No description available.Bd2+View
BD2G46230No description available.Bd2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00083G00950No description available.supercontig_83-View
CP00027G00020No description available.supercontig_27+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA09G06770CC_gene:spen,CC_gene:dpy-22,CC_gene:DDB_G0272472,CC_gene:PF13_0198,CC_gene:rlf2,CC_functional_completeness:complete,PRODUCT:DDT%2C putative%2C expressed,GO:0043565,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr9-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G48170homeobox domain containing protein, expressed1+View
OS05G48820DDT, putative, expressed5-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_05G42940No description available.Chr05-View
OSINDICA_01G45560No description available.Chr01+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G13550No description available.Chr07+View
PT11G05770No description available.Chr11-View
PT04G04870No description available.Chr04-View
PT17G01620No description available.Chr17-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB09G028415No description available.chr_9-View
SB03G030770No description available.chr_3+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI003G14770No description available.scaffold_3+View
SI005G27260No description available.scaffold_5+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G01410name=GSVIVG01021113001;chr10-View
VV12G02040name=GSVIVG01020605001;chr12+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G35270No description available.3-View
ZM08G25270No description available.8+View
ZM06G31070No description available.6-View


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Gene id
Species
Description
Chromosome
Strand