Anchorpoints
- Gene id
- SL02G072000
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G055710 | Heat stress transcription factor A3 (AHRD V1 *-*- D1M7W9_SOLLC)%3B contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type%2C DNA-binding | ch07 | - | View |
SL03G006000 | Heat stress transcription factor A3 (AHRD V1 *-*- D1M7W9_SOLLC)%3B contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type%2C DNA-binding | ch03 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G18870 | E2F/DP family winged-helix DNA-binding domain; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2839 Blast hits to 1582 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 505; Fungi - 454; Plants - 1509; Viruses - 0; Other Eukaryotes - 371 (source: NCBI BLink). E2F/DP family winged-helix DNA-binding domain | 4 | + | View |
AT5G45710 | winged-helix DNA-binding transcription factor family protein member of Heat Stress Transcription Factor (Hsf) family ROOT HANDEDNESS 1 (RHA1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A4A (TAIR:AT4G18880.1); Has 2389 Blast hits to 2362 proteins in 250 species: Archae - 2; Bacteria - 12; Metazoa - 420; Fungi - 490; Plants - 857; Viruses - 0; Other Eukaryotes - 608 (source: NCBI BLink). | 5 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00124G00010 | No description available. | supercontig_124 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA07G25390 | CC_gene:HSF8,CC_gene:HSFA1A,CC_gene:HSFA1,CC_gene:HSFC2B,CC_gene:HSFC2A,CC_gene:HSFC1,CC_gene:HSFC1B,CC_gene:HSFC1A,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr7 | + | View |
MA08G28450 | CC_gene:HSFA1A,CC_gene:HSFA5,CC_gene:HSF8,CC_gene:HSFA1,CC_gene:HSFA1D,CC_gene:HSFA4D,CC_gene:HSFA4B,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr8 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G13800 | Heat stress transcription factor C-2a HSF-type DNA-binding domain containing protein, expressed | 2 | + | View |
OS06G35960 | Heat stress transcription factor C-2b HSF-type DNA-binding domain containing protein, expressed | 6 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_06G31630 | No description available. | Chr06 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT04G06230 | No description available. | Chr04 | - | View |
PT08G13680 | No description available. | Chr08 | + | View |
PT11G07170 | No description available. | Chr11 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV12G03430 | name=GSVIVG01020781001; | chr12 | + | View |
VV10G02600 | name=GSVIVG01021269001; | chr10 | - | View |