Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL07G055710Heat stress transcription factor A3 (AHRD V1 *-*- D1M7W9_SOLLC)%3B contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type%2C DNA-bindingch07-View
SL03G006000Heat stress transcription factor A3 (AHRD V1 *-*- D1M7W9_SOLLC)%3B contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type%2C DNA-bindingch03+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G18870E2F/DP family winged-helix DNA-binding domain; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2839 Blast hits to 1582 proteins in 201 species: Archae - 0; Bacteria - 0; Metazoa - 505; Fungi - 454; Plants - 1509; Viruses - 0; Other Eukaryotes - 371 (source: NCBI BLink). E2F/DP family winged-helix DNA-binding domain4+View
AT5G45710winged-helix DNA-binding transcription factor family protein member of Heat Stress Transcription Factor (Hsf) family ROOT HANDEDNESS 1 (RHA1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A4A (TAIR:AT4G18880.1); Has 2389 Blast hits to 2362 proteins in 250 species: Archae - 2; Bacteria - 12; Metazoa - 420; Fungi - 490; Plants - 857; Viruses - 0; Other Eukaryotes - 608 (source: NCBI BLink).5+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00124G00010No description available.supercontig_124+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA07G25390CC_gene:HSF8,CC_gene:HSFA1A,CC_gene:HSFA1,CC_gene:HSFC2B,CC_gene:HSFC2A,CC_gene:HSFC1,CC_gene:HSFC1B,CC_gene:HSFC1A,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr7+View
MA08G28450CC_gene:HSFA1A,CC_gene:HSFA5,CC_gene:HSF8,CC_gene:HSFA1,CC_gene:HSFA1D,CC_gene:HSFA4D,CC_gene:HSFA4B,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G13800Heat stress transcription factor C-2a HSF-type DNA-binding domain containing protein, expressed2+View
OS06G35960Heat stress transcription factor C-2b HSF-type DNA-binding domain containing protein, expressed6-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_06G31630No description available.Chr06-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G06230No description available.Chr04-View
PT08G13680No description available.Chr08+View
PT11G07170No description available.Chr11-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G03430name=GSVIVG01020781001;chr12+View
VV10G02600name=GSVIVG01021269001;chr10-View


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Gene id
Species
Description
Chromosome
Strand