Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL03G044000Ribosomal protein L26 (AHRD V1 ***- A8HMG7_CHLRE)%3B contains Interpro domain(s) IPR005756 Ribosomal protein L26%2C eukaryotic/archaealch03+View
SL02G092430Ribosomal protein L26 (AHRD V1 ***- A8HMG7_CHLRE)%3B contains Interpro domain(s) IPR005756 Ribosomal protein L26%2C eukaryotic/archaealch02+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G49910Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: response to cold, translation; LOCATED IN: in 8 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT5G67510.1); Has 1113 Blast hits to 1113 proteins in 414 species: Archae - 314; Bacteria - 5; Metazoa - 375; Fungi - 141; Plants - 96; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). Translation protein SH3-like family protein3+View
AT5G67510Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro:IPR005756), Ribosomal protein L24, SH3-like (InterPro:IPR014723), Ribosomal protein L24/L26, conserved site (InterPro:IPR005825), KOW (InterPro:IPR005824); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT3G49910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Translation protein SH3-like family protein5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G05590No description available.Chr07-View


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Gene id
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Description
Chromosome
Strand