Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- SL01G091010
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL08G079100 | CRABS CLAW (Fragment) (AHRD V1 **-- Q5EMM8_GOSHI)%3B contains Interpro domain(s) IPR006780 YABBY protein | ch08 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G45190 | ABNORMAL FLORAL ORGANS (AFO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT4G00180.1); Has 454 Blast hits to 452 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 436; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). Plant-specific transcription factor YABBY family protein Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS). | 2 | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD5G16910 | No description available. | Bd5 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00145G00030 | No description available. | supercontig_145 | - | View |
| CP00029G01190 | No description available. | supercontig_29 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT14G06670 | No description available. | Chr14 | - | View |
| PT01G12020 | No description available. | Chr01 | + | View |
| PT03G11280 | No description available. | Chr03 | - | View |
| PT02G14510 | No description available. | Chr02 | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB06G023770 | No description available. | chr_6 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV15G09160 | name=GSVIVG01027648001; | chr15 | + | View |
| VV02G00060 | name=GSVIVG01001269001; | chr2 | + | View |