PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: SL01G080670
Organism: Solanum lycopersicum

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT5G18830	squamosa promoter binding protein-like 7 (SPL7); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: copper ion homeostasis, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 (TAIR:AT2G47070.1). Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c. squamosa promoter binding protein-like 7	5	+	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS05G33810	Squamosa promoter-binding-like protein 9 OsSPL9 - SBP-box gene family member, expressed	5	+	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_05G30220	No description available.	Chr05	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT08G19700	No description available.	Chr08	+	View
PT10G02620	No description available.	Chr10	+	View

Sorghum bicolor

Gene id	Description	Chromosome	Strand	Multiplicon
SB09G020110	No description available.	chr_9	+	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI003G24900	No description available.	scaffold_3	-	View