Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL12G099530Sentrin-specific protease 2 (AHRD V1 *-*- B6TMK2_MAIZE)%3B contains Interpro domain(s) IPR003653 Peptidase C48%2C SUMO/Sentrin/Ubl1ch12+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G06910UB-like protease 1A UB-like protease 1A (ULP1A); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G15880.1); Has 1394 Blast hits to 1393 proteins in 209 species: Archae - 0; Bacteria - 2; Metazoa - 593; Fungi - 272; Plants - 373; Viruses - 5; Other Eukaryotes - 149 (source: NCBI BLink). Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. In vitro assays suggest that this enzyme is active against SUMO1 and SUMO2. It has weak activity with SUMO3 and cannot act on SUMO5. The N-terminal regulatory region of this protein is required for full activity.3-View
AT4G15880Cysteine proteinases superfamily protein EARLY IN SHORT DAYS 4 (ESD4); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1A (TAIR:AT3G06910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.4+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G18100No description available.Bd1-View
BD1G62760No description available.Bd1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00016G01810No description available.supercontig_16+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G22400ulp1 protease family protein, putative, expressed3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G21520No description available.Chr03-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G22150No description available.Chr08-View
PT10G01360No description available.Chr10-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G035640No description available.chr_1+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G42020No description available.scaffold_9+View
SI002G43860No description available.scaffold_2+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G40800No description available.2+View
ZM01G15130sentrin-specific protease 21-View


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Gene id
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Description
Chromosome
Strand