Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- SI009G46750
- Organism
- Setaria italica
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI005G38600 | No description available. | scaffold_5 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G29130 | putative laccase, knockout mutant had reduced root elongation under PEG-induced dehydration laccase 2 (LAC2); FUNCTIONS IN: laccase activity; INVOLVED IN: response to water deprivation; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 17 (TAIR:AT5G60020.1); Has 9820 Blast hits to 8133 proteins in 1393 species: Archae - 28; Bacteria - 3936; Metazoa - 505; Fungi - 3408; Plants - 1575; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). laccase 2 | 2 | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD2G54680 | No description available. | Bd2 | - | View |
| BD1G66720 | No description available. | Bd1 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA02G16750 | CC_gene:LAC22,CC_gene:LAC5,CC_gene:LAC11,CC_gene:LAC10,CC_gene:LAC2,CC_gene:LAC12,CC_gene:LAC17,CC_gene:LAC4,CC_functional_completeness:complete,PRODUCT:Laccase-4,GO:0055114,GO:0048046,GO:0046274,GO:0016491,GO:0008471,GO:0005507,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.10.3.3 | chr2 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS01G62480 | Laccase-4 laccase precursor protein, putative, expressed | 1 | - | View |
| OS03G16610 | Laccase-10 laccase precursor protein, putative, expressed | 3 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_01G59150 | No description available. | Chr01 | - | View |
| OSINDICA_03G14990 | No description available. | Chr03 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G24320 | No description available. | Chr01 | - | View |
| PT06G08710 | No description available. | Chr06 | + | View |
| PT09G03450 | No description available. | Chr09 | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB03G039520 | No description available. | chr_3 | - | View |
| SB01G039690 | No description available. | chr_1 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G076330 | Laccase (AHRD V1 **** O24044_LIRTU)%3B contains Interpro domain(s) IPR017761 Laccase | ch06 | - | View |
| SL09G010990 | Laccase (AHRD V1 ***- O24044_LIRTU)%3B contains Interpro domain(s) IPR017761 Laccase | ch09 | + | View |
| SL05G052340 | Laccase (AHRD V1 ***- Q9ZP47_POPTR)%3B contains Interpro domain(s) IPR017761 Laccase | ch05 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV08G14370 | name=GSVIVG01034146001; | chr8 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM03G27170 | putative laccase | 3 | - | View |
| ZM01G11210 | No description available. | 1 | - | View |