Expansion plot
Gene family finder
Ks-graphs
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Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- SI009G45820
- Organism
- Setaria italica
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G02830 | Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR-like) superfamily protein (TAIR:AT1G09900.1); Has 31969 Blast hits to 11487 proteins in 269 species: Archae - 3; Bacteria - 39; Metazoa - 341; Fungi - 298; Plants - 29991; Viruses - 0; Other Eukaryotes - 1297 (source: NCBI BLink). Tetratricopeptide repeat (TPR)-like superfamily protein | 5 | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G65860 | No description available. | Bd1 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA07G15880 | CC_gene:At1g06710,CC_gene:At5g59900,CC_gene:PTAC2,CC_gene:At5g12100,CC_gene:At5g02860,CC_gene:EMB2745,CC_gene:At2g31400,CC_gene:At5g02830,CC_functional_completeness:fragment,PRODUCT:Pentatricopeptide repeat-containing protein At5g02830%2C chloroplastic,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr7 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS03G17634 | PPR repeat domain containing protein, putative, expressed | 3 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_03G16240 | No description available. | Chr03 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT06G13270 | No description available. | Chr06 | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB01G038770 | No description available. | chr_1 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL09G007200 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7M7W8_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | ch09 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV08G01720 | name=GSVIVG01025541001; | chr8 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM01G11970 | No description available. | 1 | - | View |
| ZM09G23370 | No description available. | 9 | + | View |