Anchorpoints

Gene id
SI009G35980
Organism
Setaria italica

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SI007G21040No description available.scaffold_7+View
SI002G28750No description available.scaffold_2-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G52050MATE efflux family protein MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G23030.1); Has 10796 Blast hits to 10712 proteins in 2003 species: Archae - 245; Bacteria - 7617; Metazoa - 145; Fungi - 324; Plants - 1294; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink).5+View
AT4G22790MATE efflux family protein MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 7578 Blast hits to 7441 proteins in 1706 species: Archae - 65; Bacteria - 4933; Metazoa - 143; Fungi - 328; Plants - 1275; Viruses - 0; Other Eukaryotes - 834 (source: NCBI BLink).4-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G31580No description available.Bd3+View
BD4G35660No description available.Bd4-View
BD3G51590No description available.Bd3+View
BD5G18830No description available.Bd5+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00107G00040No description available.supercontig_107+View
CP00074G00860No description available.supercontig_74+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA08G12380CC_gene:Slc47a1,CC_gene:SLC47A1,CC_gene:Slc47a2,CC_gene:slc47a1,CC_functional_completeness:fragment,PRODUCT:Putative Multidrug and toxin extrusion protein 1,GO:0055085,GO:0016020,GO:0015297,GO:0015238,GO:0006855,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View
MA03G18580CC_gene:SPAC323.07c,CC_gene:Slc47a1,CC_gene:Slc47a2,CC_gene:SLC47A1,CC_gene:slc47a1,CC_functional_completeness:fragment,PRODUCT:Putative Multidrug and toxin extrusion protein 1,GO:0055085,GO:0016020,GO:0015297,GO:0015238,GO:0006855,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr3-View
MA11G03280CC_gene:Slc47a2,CC_gene:SLC47A1,CC_gene:slc47a1,CC_gene:Slc47a1,CC_functional_completeness:complete,PRODUCT:Putative Multidrug and toxin extrusion protein 1,GO:0055085,GO:0016020,GO:0015297,GO:0015238,GO:0006855,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr11-View
MA05G20680CC_gene:SPCC4B3.13,CC_gene:slc47a1,CC_gene:Slc47a2,CC_gene:SLC47A1,CC_gene:Slc47a1,CC_functional_completeness:fragment,PRODUCT:Putative Multidrug and toxin extrusion protein 1,GO:0055085,GO:0016020,GO:0015297,GO:0015238,GO:0006855,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr5+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G48290MATE efflux family protein, putative, expressed4+View
OS08G43654MATE efflux family protein, putative, expressed8-View
OS10G37920MATE efflux family protein, putative, expressed10+View
OS09G35600MATE domain containing protein, expressed9-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_09G27910No description available.Chr09-View
OSINDICA_10G28300No description available.Chr10+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G12140No description available.Chr03+View
PT15G13560No description available.Chr15-View
PT12G13350No description available.Chr12-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB02G030360No description available.chr_2-View
SB01G031150No description available.chr_1-View
SB04G031980No description available.chr_4-View
SB06G025870No description available.chr_6+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G026230Multidrug resistance protein mdtK (AHRD V1 *-*- MDTK_ENT38)%3B contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatEch03-View
SL08G005880Multidrug resistance protein mdtK (AHRD V1 **-- MDTK_PROMH)%3B contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatEch08+View
SL08G080310Multidrug resistance protein mdtK (AHRD V1 *-*- MDTK_PROMH)%3B contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatEch08+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G07250name=GSVIVG01019858001;chr2-View
VV17G06670name=GSVIVG01008370001;chr17-View
VV16G00660name=GSVIVG01010621001;chr16+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G19470No description available.1+View
ZM02G06920No description available.2-View
ZM05G36470No description available.5+View
ZM07G19780No description available.7-View
ZM10G22010No description available.10-View


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Gene id
Species
Description
Chromosome
Strand