Anchorpoints
- Gene id
- SI009G35980
- Organism
- Setaria italica
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI007G21040 | No description available. | scaffold_7 | + | View |
SI002G28750 | No description available. | scaffold_2 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G52050 | MATE efflux family protein MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G23030.1); Has 10796 Blast hits to 10712 proteins in 2003 species: Archae - 245; Bacteria - 7617; Metazoa - 145; Fungi - 324; Plants - 1294; Viruses - 0; Other Eukaryotes - 1171 (source: NCBI BLink). | 5 | + | View |
AT4G22790 | MATE efflux family protein MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G29140.1); Has 7578 Blast hits to 7441 proteins in 1706 species: Archae - 65; Bacteria - 4933; Metazoa - 143; Fungi - 328; Plants - 1275; Viruses - 0; Other Eukaryotes - 834 (source: NCBI BLink). | 4 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD3G31580 | No description available. | Bd3 | + | View |
BD4G35660 | No description available. | Bd4 | - | View |
BD3G51590 | No description available. | Bd3 | + | View |
BD5G18830 | No description available. | Bd5 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00107G00040 | No description available. | supercontig_107 | + | View |
CP00074G00860 | No description available. | supercontig_74 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA08G12380 | CC_gene:Slc47a1,CC_gene:SLC47A1,CC_gene:Slc47a2,CC_gene:slc47a1,CC_functional_completeness:fragment,PRODUCT:Putative Multidrug and toxin extrusion protein 1,GO:0055085,GO:0016020,GO:0015297,GO:0015238,GO:0006855,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr8 | + | View |
MA03G18580 | CC_gene:SPAC323.07c,CC_gene:Slc47a1,CC_gene:Slc47a2,CC_gene:SLC47A1,CC_gene:slc47a1,CC_functional_completeness:fragment,PRODUCT:Putative Multidrug and toxin extrusion protein 1,GO:0055085,GO:0016020,GO:0015297,GO:0015238,GO:0006855,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | - | View |
MA11G03280 | CC_gene:Slc47a2,CC_gene:SLC47A1,CC_gene:slc47a1,CC_gene:Slc47a1,CC_functional_completeness:complete,PRODUCT:Putative Multidrug and toxin extrusion protein 1,GO:0055085,GO:0016020,GO:0015297,GO:0015238,GO:0006855,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr11 | - | View |
MA05G20680 | CC_gene:SPCC4B3.13,CC_gene:slc47a1,CC_gene:Slc47a2,CC_gene:SLC47A1,CC_gene:Slc47a1,CC_functional_completeness:fragment,PRODUCT:Putative Multidrug and toxin extrusion protein 1,GO:0055085,GO:0016020,GO:0015297,GO:0015238,GO:0006855,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr5 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS04G48290 | MATE efflux family protein, putative, expressed | 4 | + | View |
OS08G43654 | MATE efflux family protein, putative, expressed | 8 | - | View |
OS10G37920 | MATE efflux family protein, putative, expressed | 10 | + | View |
OS09G35600 | MATE domain containing protein, expressed | 9 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_09G27910 | No description available. | Chr09 | - | View |
OSINDICA_10G28300 | No description available. | Chr10 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G12140 | No description available. | Chr03 | + | View |
PT15G13560 | No description available. | Chr15 | - | View |
PT12G13350 | No description available. | Chr12 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB02G030360 | No description available. | chr_2 | - | View |
SB01G031150 | No description available. | chr_1 | - | View |
SB04G031980 | No description available. | chr_4 | - | View |
SB06G025870 | No description available. | chr_6 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G026230 | Multidrug resistance protein mdtK (AHRD V1 *-*- MDTK_ENT38)%3B contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE | ch03 | - | View |
SL08G005880 | Multidrug resistance protein mdtK (AHRD V1 **-- MDTK_PROMH)%3B contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE | ch08 | + | View |
SL08G080310 | Multidrug resistance protein mdtK (AHRD V1 *-*- MDTK_PROMH)%3B contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE | ch08 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV02G07250 | name=GSVIVG01019858001; | chr2 | - | View |
VV17G06670 | name=GSVIVG01008370001; | chr17 | - | View |
VV16G00660 | name=GSVIVG01010621001; | chr16 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM01G19470 | No description available. | 1 | + | View |
ZM02G06920 | No description available. | 2 | - | View |
ZM05G36470 | No description available. | 5 | + | View |
ZM07G19780 | No description available. | 7 | - | View |
ZM10G22010 | No description available. | 10 | - | View |