Anchorpoints

Gene id
SI005G37400
Organism
Setaria italica

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G30210laccase 3 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 3 (LAC3); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: hypocotyl, fruit, root, seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 13 (TAIR:AT5G07130.1); Has 11124 Blast hits to 9161 proteins in 1586 species: Archae - 42; Bacteria - 5039; Metazoa - 506; Fungi - 3547; Plants - 1577; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink).2-View
AT2G40370laccase 5 laccase 5 (LAC5); FUNCTIONS IN: laccase activity; INVOLVED IN: response to copper ion; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 10120 Blast hits to 8186 proteins in 1337 species: Archae - 37; Bacteria - 4008; Metazoa - 431; Fungi - 3685; Plants - 1575; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). putative laccase, a member of laccase family of genes (17 members in Arabidopsis).2-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G53800No description available.Bd2+View
BD4G44810No description available.Bd4+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00002G03320No description available.supercontig_2+View
CP00019G01210No description available.supercontig_19+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G18640laccase precursor protein, putative, expressed3+View
OS01G61160laccase precursor protein, putative, expressed Laccase-31+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G17400No description available.Chr03+View
OSINDICA_01G57800No description available.Chr01+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G15270No description available.Chr13-View
PT10G18350No description available.Chr10+View
PT08G07370No description available.Chr08-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G038550No description available.chr_3+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G076830Laccase 1a (AHRD V1 ***- B9IG56_POPTR)%3B contains Interpro domain(s) IPR017761 Laccasech10-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G00980name=GSVIVG01024634001;chr6-View
VV13G09850name=GSVIVG01032744001;chr13-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G28090L-ascorbate oxidase3-View
ZM08G32650No description available.8-View


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Gene id
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Description
Chromosome
Strand