Anchorpoints
- Gene id
- SI003G05520
- Organism
- Setaria italica
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI005G03310 | No description available. | scaffold_5 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G62150 | P-glycoprotein 21 (PGP21); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ATP binding cassette subfamily B4 (TAIR:AT2G47000.1); Has 850676 Blast hits to 393228 proteins in 4171 species: Archae - 14744; Bacteria - 664075; Metazoa - 17906; Fungi - 12823; Plants - 9925; Viruses - 47; Other Eukaryotes - 131156 (source: NCBI BLink). Encodes a facultative transporter controlling auxin concentrations in plant cells. P-glycoprotein 21 | 3 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD2G11210 | No description available. | Bd2 | - | View |
BD2G36897 | No description available. | Bd2 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA03G13180 | CC_gene:Abcb4,CC_gene:ABCB10,CC_gene:ABCB22,CC_gene:ABCB15,CC_gene:ABCB17,CC_gene:ABCB18,CC_gene:pmd1,CC_gene:Os02g0190300,CC_functional_completeness:fragment,PRODUCT:Putative multidrug resistance protein,GO:0055085,GO:0016887,GO:0016021,GO:0006810,GO:0005524,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.44 | chr3 | + | View |
MA01G26030 | CC_gene:ABCB7,CC_gene:ABCB9,CC_gene:ABCB4,CC_gene:ABCB5,CC_gene:ABCB21,CC_gene:ABCB3,CC_gene:ABCB12,CC_gene:ABCB11,CC_functional_completeness:fragment,PRODUCT:Putative ABC transporter B family member 11,GO:0055085,GO:0016021,GO:0006810,GO:0005524,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.44 | chr1 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G18670 | MDR-like ABC transporter, putative, expressed | 1 | - | View |
OS05G04610 | ABC transporter, ATP-binding protein, putative, expressed | 5 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_01G17950 | No description available. | Chr01 | - | View |
OSINDICA_05G03530 | No description available. | Chr05 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G00300 | No description available. | Chr10 | + | View |
PT02G18740 | No description available. | Chr02 | - | View |
PT14G11300 | No description available. | Chr14 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB03G011860 | No description available. | chr_3 | - | View |
SB09G002940 | No description available. | chr_9 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G009280 | Lipid A export ATP-binding/permease protein msbA (AHRD V1 *--- MSBA_SYNAS)%3B contains Interpro domain(s) IPR003439 ABC transporter-like | ch06 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV05G02550 | name=GSVIVG01017696001; | chr5 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G10370 | No description available. | 3 | - | View |