Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- SI002G33810
- Organism
- Setaria italica
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G04640 | ATPase, F1 complex, gamma subunit protein One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase. ATPC1; FUNCTIONS IN: enzyme regulator activity; INVOLVED IN: photosynthetic electron transport in photosystem II, ATP synthesis coupled proton transport, ATP biosynthetic process; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F1 complex, gamma subunit (InterPro:IPR000131); BEST Arabidopsis thaliana protein match is: ATPase, F1 complex, gamma subunit protein (TAIR:AT1G15700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 4 | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G26350 | No description available. | Bd1 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00152G00160 | No description available. | supercontig_152 | + | View |
| CP00012G03020 | No description available. | supercontig_12 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS07G32880 | ATP synthase gamma chain, putative, expressed | 7 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_07G25790 | No description available. | Chr07 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT11G00380 | No description available. | Chr11 | + | View |
| PT04G01480 | No description available. | Chr04 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL02G080540 | ATP synthase gamma chain (AHRD V1 ***- B7FIR4_MEDTR)%3B contains Interpro domain(s) IPR000131 ATPase%2C F1 complex%2C gamma subunit | ch02 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM07G22910 | ATP synthase subunit gamma, chloroplastic ATP synthase subunit gamma, chloroplastic Precursor (F-ATPase gamma subunit) [Contains Inceptin] | 7 | - | View |
| ZM02G36190 | No description available. | 2 | - | View |