Anchorpoints

Gene id
SB10G026410
Organism
Sorghum bicolor

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SB07G026895No description available.chr_7+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G57210Ypt/Rab-GAP domain of gyp1p superfamily protein Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G29950.1); Has 1722 Blast hits to 1340 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 717; Fungi - 361; Plants - 287; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink).5-View
AT2G19240Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G29950.1); Has 1541 Blast hits to 1252 proteins in 224 species: Archae - 0; Bacteria - 17; Metazoa - 583; Fungi - 285; Plants - 264; Viruses - 0; Other Eukaryotes - 392 (source: NCBI BLink). Ypt/Rab-GAP domain of gyp1p superfamily protein2-View
AT4G29950Ypt/Rab-GAP domain of gyp1p superfamily protein Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G19240.1); Has 1856 Blast hits to 1473 proteins in 235 species: Archae - 2; Bacteria - 59; Metazoa - 791; Fungi - 326; Plants - 250; Viruses - 6; Other Eukaryotes - 422 (source: NCBI BLink).4+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G31650No description available.Bd1-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA09G23580CC_gene:Tbc1d13,CC_gene:TBC1D22B,CC_gene:TBC1D13,CC_gene:SPAC1952.17c,CC_gene:tbc1d5B,CC_gene:tbc1d5A,CC_gene:Tbc1d5,CC_gene:TBC1D5,CC_functional_completeness:complete,PRODUCT:rabGAP/TBC domain-containing protein%2C putative%2C expressed,GO:0032313,GO:0005622,GO:0005097,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr9-View
MA08G24500CC_gene:TBC1D22B,CC_gene:SPAC1952.17c,CC_gene:Tbc1d13,CC_gene:TBC1D13,CC_gene:tbc1d5A,CC_gene:tbc1d5B,CC_gene:TBC1D5,CC_gene:Tbc1d5,CC_functional_completeness:complete,PRODUCT:rabGAP/TBC domain-containing protein%2C putative%2C expressed,GO:0032313,GO:0005622,GO:0005097,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View
MA03G05660CC_gene:gyp1,CC_gene:SPAC1952.17c,CC_gene:Tbc1d13,CC_gene:TBC1D13,CC_gene:TBC1D5,CC_gene:Tbc1d5,CC_gene:tbc1d5B,CC_gene:tbc1d5A,CC_functional_completeness:fragment,PRODUCT:Putative TBC1 domain family member 5 homolog A,GO:0032313,GO:0005622,GO:0005097,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr3+View
MA07G16420CC_gene:SPAC1952.17c,CC_gene:GYP1,CC_gene:Tbc1d13,CC_gene:TBC1D13,CC_gene:tbc1d5B,CC_gene:tbc1d5A,CC_gene:Tbc1d5,CC_gene:TBC1D5,CC_functional_completeness:complete,PRODUCT:rabGAP/TBC domain-containing protein%2C putative%2C expressed,GO:0032313,GO:0005622,GO:0005097,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr7-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS08G40620rabGAP%2FTBC domain-containing protein, putative, expressed8+View
OS06G45080rabGAP%2FTBC domain-containing protein, putative, expressed6-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_06G40980No description available.Chr06-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT18G14310No description available.Chr18-View
PT06G07600No description available.Chr06-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI004G19190No description available.scaffold_4+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G008840TBC1 domain family member 5 (AHRD V1 *--- B9A6K1_HUMAN)%3B contains Interpro domain(s) IPR000195 RabGAP/TBCch07-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G00620name=GSVIVG01010868001;chr11+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G16240No description available.9+View


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Gene id
Species
Description
Chromosome
Strand