Anchorpoints
- Gene id
- SB10G026410
- Organism
- Sorghum bicolor
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB07G026895 | No description available. | chr_7 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G57210 | Ypt/Rab-GAP domain of gyp1p superfamily protein Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G29950.1); Has 1722 Blast hits to 1340 proteins in 214 species: Archae - 0; Bacteria - 4; Metazoa - 717; Fungi - 361; Plants - 287; Viruses - 0; Other Eukaryotes - 353 (source: NCBI BLink). | 5 | - | View |
AT2G19240 | Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G29950.1); Has 1541 Blast hits to 1252 proteins in 224 species: Archae - 0; Bacteria - 17; Metazoa - 583; Fungi - 285; Plants - 264; Viruses - 0; Other Eukaryotes - 392 (source: NCBI BLink). Ypt/Rab-GAP domain of gyp1p superfamily protein | 2 | - | View |
AT4G29950 | Ypt/Rab-GAP domain of gyp1p superfamily protein Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G19240.1); Has 1856 Blast hits to 1473 proteins in 235 species: Archae - 2; Bacteria - 59; Metazoa - 791; Fungi - 326; Plants - 250; Viruses - 6; Other Eukaryotes - 422 (source: NCBI BLink). | 4 | + | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD1G31650 | No description available. | Bd1 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA09G23580 | CC_gene:Tbc1d13,CC_gene:TBC1D22B,CC_gene:TBC1D13,CC_gene:SPAC1952.17c,CC_gene:tbc1d5B,CC_gene:tbc1d5A,CC_gene:Tbc1d5,CC_gene:TBC1D5,CC_functional_completeness:complete,PRODUCT:rabGAP/TBC domain-containing protein%2C putative%2C expressed,GO:0032313,GO:0005622,GO:0005097,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr9 | - | View |
MA08G24500 | CC_gene:TBC1D22B,CC_gene:SPAC1952.17c,CC_gene:Tbc1d13,CC_gene:TBC1D13,CC_gene:tbc1d5A,CC_gene:tbc1d5B,CC_gene:TBC1D5,CC_gene:Tbc1d5,CC_functional_completeness:complete,PRODUCT:rabGAP/TBC domain-containing protein%2C putative%2C expressed,GO:0032313,GO:0005622,GO:0005097,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr8 | + | View |
MA03G05660 | CC_gene:gyp1,CC_gene:SPAC1952.17c,CC_gene:Tbc1d13,CC_gene:TBC1D13,CC_gene:TBC1D5,CC_gene:Tbc1d5,CC_gene:tbc1d5B,CC_gene:tbc1d5A,CC_functional_completeness:fragment,PRODUCT:Putative TBC1 domain family member 5 homolog A,GO:0032313,GO:0005622,GO:0005097,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | + | View |
MA07G16420 | CC_gene:SPAC1952.17c,CC_gene:GYP1,CC_gene:Tbc1d13,CC_gene:TBC1D13,CC_gene:tbc1d5B,CC_gene:tbc1d5A,CC_gene:Tbc1d5,CC_gene:TBC1D5,CC_functional_completeness:complete,PRODUCT:rabGAP/TBC domain-containing protein%2C putative%2C expressed,GO:0032313,GO:0005622,GO:0005097,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr7 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS08G40620 | rabGAP%2FTBC domain-containing protein, putative, expressed | 8 | + | View |
OS06G45080 | rabGAP%2FTBC domain-containing protein, putative, expressed | 6 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_06G40980 | No description available. | Chr06 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT18G14310 | No description available. | Chr18 | - | View |
PT06G07600 | No description available. | Chr06 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI004G19190 | No description available. | scaffold_4 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G008840 | TBC1 domain family member 5 (AHRD V1 *--- B9A6K1_HUMAN)%3B contains Interpro domain(s) IPR000195 RabGAP/TBC | ch07 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV11G00620 | name=GSVIVG01010868001; | chr11 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM09G16240 | No description available. | 9 | + | View |