Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- SB10G026120
- Organism
- Sorghum bicolor
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB04G005230 | CASP-like protein Sb04g005230 | chr_4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G25830 | Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G35760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Uncharacterised protein family (UPF0497) | 4 | + | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G31240 | No description available. | Bd1 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA04G13020 | CC_gene:Sb04g005230,CC_gene:XL3,CC_gene:Sb10g026120,CC_gene:Os06g0656300,CC_gene:Os02g0177700,CC_functional_completeness:complete,PRODUCT:UPF0497 membrane protein Os02g0177700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr4 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS06G44610 | CASP-like protein Os06g0656300 membrane associated DUF588 domain containing protein, putative, expressed | 6 | + | View |
| OS02G08110 | membrane associated DUF588 domain containing protein, putative, expressed CASP-like protein Os02g0177700 | 2 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_02G07860 | No description available. | Chr02 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT18G09450 | CASP-like protein POPTRDRAFT_578614 | Chr18 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI001G06900 | No description available. | scaffold_1 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV11G08860 | name=GSVIVG01029179001; | chr11 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM06G12470 | UPF0497 membrane protein 14 CASP-like protein 13 | 6 | - | View |
| ZM05G20970 | UPF0497 membrane protein 10 CASP-like protein 9 | 5 | - | View |
| ZM09G16590 | CASP-like protein 11 CASP-like protein 10 UPF0497 membrane protein 11 | 9 | - | View |