PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: SB07G028380
Organism: Sorghum bicolor

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT5G56280	one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation. COP9 signalosome subunit 6A COP9 signalosome subunit 6A (CSN6A); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: COP9 signalosome subunit 6B (TAIR:AT4G26430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).	5	-	View

Brachypodium distachyon

Gene id	Description	Chromosome	Strand	Multiplicon
BD3G39500	No description available.	Bd3	-	View

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00012G00560	No description available.	supercontig_12	+	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS08G39070	COP9 signalosome complex subunit 6a, putative, expressed	8	-	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_08G37430	No description available.	Chr08	-	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT01G47300	No description available.	Chr01	-	View
PT11G16990	No description available.	Chr11	-	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI006G19770	No description available.	scaffold_6	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL10G005660	COP9 signalosome subunit 6 (AHRD V1 ***- Q2A0N7_ORYSA)%3B contains Interpro domain(s) IPR000555 Mov34/MPN/PAD-1	ch10	+	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV19G06960	name=GSVIVG01014869001;	chr19	-	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM01G31520	COP9 signalosome complex subunit 6a	1	-	View